Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00099 | ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTCTCCAACTTCCTTCAATTCCTCAAACCCATTCTCCTTCCCCTCCATTTGATCCTCCAAATTTCTCCATTTCTAGTAATAATACTAATAATAATAACAATAATAGTAATTCCAATCTCAATGAAACCCTACTTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAAGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTCAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCCGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTACCTGTTTTTTTCTTCCCTCTCTCTCTCTCAATAA | 774 | 38.11 | MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFLQLPSIPQTHSPSPPFDPPNFSISSNNTNNNNNNSNSNLNETLLSSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFWYLFFSSLSLSQ | 257 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1107478 | 1109891 | - | ClCG02G000930.1 | Cla02g00099 | 266225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00099 | 257 | Gene3D | WRKY domain | 156 | 222 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00099 | 257 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 57 | 240 | - | - | |
Cla02g00099 | 257 | MobiDBLite | consensus disorder prediction | 45 | 79 | - | - | |
Cla02g00099 | 257 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 57 | 240 | IPR044810 | GO:0003700 | |
Cla02g00099 | 257 | SMART | WRKY_cls | 169 | 228 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00099 | 257 | Pfam | WRKY DNA -binding domain | 170 | 226 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00099 | 257 | ProSiteProfiles | WRKY domain profile. | 164 | 229 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00099 | 257 | SUPERFAMILY | WRKY DNA-binding domain | 161 | 228 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00099 | 257 | MobiDBLite | consensus disorder prediction | 60 | 79 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01558 | Cla02g00099 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00099 | Cla-Chr2:1107478 | Cla08g01030 | Cla-Chr8:23025947 | 7.33E-36 | dispersed | |
Cla01g01558 | Cla-Chr1:30233134 | Cla02g00099 | Cla-Chr2:1107478 | 5.48E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60561 | PF03106 | WRKY | 4.60E-24 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00099 | - | - | cmo:103497483 | 384.03 |