Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00132 | ATGACGCTGCTTACGTGGACAAATGACATGGAAAACGAGTTCCCATCGTCGTCTTCTTCCGCTGATATGACAATTTTTTCCTTCTTCACTAGAGCTTCGAGAGCTTTTCATGGCTCCCCTGCATATTCAAAGCTTCTACTCATCAGCACCCTAAGTAGCGGAGGTCTATTGGCATATGCAGATTCACAATCAGACGTTGACAGTCCTATTGAAGAGTGCCGAAAAAAGAGAATTCTAGTGCTTGGAACAGGATGGGCCGGTACCAGTTTCCTCAAGGATCTGGATGCTTCAAAATATGATGTTCAGGTTGTTTCGCCTCAAAATTATTTCTCATTTACTCCTTTATTGCCTAGTGTTACATGTGGATCAGTTGAAGCACGAAGCATTGTTGAACCAGTTCGAAACATCGTGAAGAAGAGAAAAGGTGAAATTAAATTCTGGGAAGCTGAATGCATTAGGATTGATGCTGCTGACAAGAAGGTTTTCTGCCGGTCTAATGTTGACAACAACTTGGTTGGAAATAGGGAGTTTGCCTTAGAATATGACTATTTGATAATAGCAATGGGAGCGCAAGTTAATACTTTTAATACTCCTGGTGTGAAGGAGAACTGCCATTTTCTCAAGGAAGTGGAAGATGCTCAGAAGATCCGCAGAAGTGTGATAGATTGCTTTGAAATGGCGGTGATTCCTAGTCTAAGTGAAGAAGAGCGAAGGAGAAATCTTCATTTCGTTATTGTTGGAGGGGGTCCCACTGGGGTTGAATTTGCTGCAGAGCTTCATGACTTTTTTGAAGAAGATTTAGTAAACTTATATCCTTCGGTTAAAGATCTGGTGAAAATTTCAGTAATTCAATCCGGAGATCACATCTTGAATGCGTTTGATGAAAGAATTAGTTCATTTGCCGAGCAAAAATTCCTAAGGGACGGTATCGATGTGTACACAGGATGTCGAGTTGTCAGTGTATCTGATAAAGAAATTAAGATGAAGGTGAAATCAACTGGAGAACTTTGTTCAATGCCGCATGGACTAATTGTGTGGTCTACGGGCATTATGACTCGTCCTGTTGTGAAGGATTTCATGGAGCAGATTGGCCAGGGTAGTAGACGCATTCTAGCCACTGATGAATGGCTTCAAGTGAAGGGCGCTCAAAATGTGTATGCCATTGGTGATTGTGCTACAATTGACCAACGTAAAATTATGGAAGATATCGCCGCCATATTTAAAGCCGCAGACAAAGATAACTCTGGAACCCTGACAGTTACAGAATTTCAAGATGTTCTAGATGATATCATCATAAGGTATCCTCAAGTAGAAATATATTTGAGGAGCAAACATCTACGCGATGTAAAAGATCTATTAAAAGATTCTCAGGGACATGAGAACGAAATAGATATTGAAGGATTTAAGTCAGCTCTTTCTCATGCTGACACGCAGATGAAAAGTCTGCCTGCTACTGCACAGGTTGCTGCCCAACAAGGTGCGTATCTTTGCAGGTGCTTCAACCGCAGGGAGCATTGCACTGAGAATCCTGAAGGCCCTCGACGTTTTAAGAGTTCTGGACGTCATCAGTTTCTTCCGTTTCGGTACAAGCACTTGGGACAGTTCGCTCCTTTAGGGGGAGAACAAGCAGCTGCAGAACTCCCTGGAGATTGGGTTTCCATGGGTCACAGCACTCAATGGCTATGGTATTCTGTATATGCAAGCAAGCAAGTCAGCTGGCGCACAAGGTATCTAGTGGTATCAGATTGGACAAGGAAGTTCATATTTGGAAGAGACTCAAGCCGCATCTGA | 1791 | 42.66 | MTLLTWTNDMENEFPSSSSSADMTIFSFFTRASRAFHGSPAYSKLLLISTLSSGGLLAYADSQSDVDSPIEECRKKRILVLGTGWAGTSFLKDLDASKYDVQVVSPQNYFSFTPLLPSVTCGSVEARSIVEPVRNIVKKRKGEIKFWEAECIRIDAADKKVFCRSNVDNNLVGNREFALEYDYLIIAMGAQVNTFNTPGVKENCHFLKEVEDAQKIRRSVIDCFEMAVIPSLSEEERRRNLHFVIVGGGPTGVEFAAELHDFFEEDLVNLYPSVKDLVKISVIQSGDHILNAFDERISSFAEQKFLRDGIDVYTGCRVVSVSDKEIKMKVKSTGELCSMPHGLIVWSTGIMTRPVVKDFMEQIGQGSRRILATDEWLQVKGAQNVYAIGDCATIDQRKIMEDIAAIFKAADKDNSGTLTVTEFQDVLDDIIIRYPQVEIYLRSKHLRDVKDLLKDSQGHENEIDIEGFKSALSHADTQMKSLPATAQVAAQQGAYLCRCFNRREHCTENPEGPRRFKSSGRHQFLPFRYKHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRYLVVSDWTRKFIFGRDSSRI | 596 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1458716 | 1464178 | + | ClCG02G001290.1 | Cla02g00132 | 266258 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00132 | 596 | ProSitePatterns | EF-hand calcium-binding domain. | 411 | 423 | IPR018247 | - | |
Cla02g00132 | 596 | Gene3D | - | 445 | 595 | - | - | |
Cla02g00132 | 596 | Gene3D | - | 68 | 419 | - | - | |
Cla02g00132 | 596 | SUPERFAMILY | FAD/NAD(P)-binding domain | 241 | 395 | IPR036188 | - | |
Cla02g00132 | 596 | PANTHER | NADH DEHYDROGENASE | 66 | 596 | IPR045024 | GO:0003954|GO:0006116 | |
Cla02g00132 | 596 | SMART | efh_1 | 402 | 430 | IPR002048 | GO:0005509 | |
Cla02g00132 | 596 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 398 | 433 | IPR002048 | GO:0005509 | |
Cla02g00132 | 596 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 242 | 260 | - | - | |
Cla02g00132 | 596 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 181 | 199 | - | - | |
Cla02g00132 | 596 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 78 | 97 | - | - | |
Cla02g00132 | 596 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 77 | 405 | IPR023753 | GO:0016491 | |
Cla02g00132 | 596 | SUPERFAMILY | EF-hand | 394 | 482 | IPR011992 | - | |
Cla02g00132 | 596 | SUPERFAMILY | FAD/NAD(P)-binding domain | 75 | 294 | IPR036188 | - | |
Cla02g00132 | 596 | PANTHER | EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL | 66 | 596 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00132 | Cla-Chr2:1458716 | Cla02g01903 | Cla-Chr2:34194623 | 1.87E-14 | dispersed | |
Cla01g01138 | Cla-Chr1:19020637 | Cla02g00132 | Cla-Chr2:1458716 | 6.07E-09 | transposed | |
Cla01g02215 | Cla-Chr1:36111535 | Cla02g00132 | Cla-Chr2:1458716 | 1.88E-14 | wgd | |
Cla02g00132 | Cla-Chr2:1458716 | Cla02g01697 | Cla-Chr2:31839586 | 0 | wgd | |
Cla02g00132 | Cla-Chr2:1458716 | Cla03g00519 | Cla-Chr3:5738128 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00132 | K03885 | - | csv:101203130 | 1097.8 |