Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00146 ATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTAGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG 1071 43.7 MLKRPQRFWVFPIKCPIKYDIRDVPYSCMQSNTALPSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1595679 1597872 + ClCG02G001440.1 Cla02g00146 266272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00146 356 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 104 356 - -
Cla02g00146 356 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 104 356 IPR005691 -
Cla02g00146 356 Pfam Chloroplast import apparatus Tic20-like 176 341 IPR005691 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00146 Cla-Chr2:1595679 Cla06g00266 Cla-Chr6:3416208 4.26E-52 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00146 - - csv:101219652 545.043