Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00149 ATGAATTGTACTGCTCGATGGCTTTGCTTTGTCTCAGGCTATAGAATCGCACCATCTGGACCATCAAAGAACGTGCAATCGACGAAATGTTTGTTGGTAAATGGCTTGATCATGTGGGCCACGGGGGAAAGCGACATTTTTGTATTGTTGTTGAAACCAAAAAGAAAGGATGAATGGAGGAAGATAGAAATTGAGGAGAGGGAACATGTTTGTTGCATAGCAGAAGTAGTGAAATGGTGGCCAAAAGAAGTGTCAAGAACTTGGTCACCATCAGCTGGTTTGCAGAGTGATGAGAGAGGGGATACTCTTGTATCGGCAGGATCGAGATTCGAACTCGGATTCTTTAAGCCATATGGCAGCTCTCATAGCAGAAGATACTTGGGAATATGCCCACTTGCAGGTTCAGATGGTATCTTTAAGATTGAGGATGATGGCAACCTCAAAGTATATGATGGAAATCAGAATCTGTATTGGTCAACAAACATTGGAAGTTCTGTACTCGATCGAAGGACTCTGAAGTTATTGGATAATGGAAATCTGGTCTTGAGTTATGCAGATCAAGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGTTAATGGATGATAACTTGGTGCTGACTTCATGGAAGAGCTATGATGACCCGGCTCGAGGGAACTTCACTTTTCAGCTAGATCAAGACGGAGGTCAATATGTCATTTGGAAAAGATCAGTTAAATTCTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCATTATCTAAACTGGGAAGATCACAAAGTGTGGTCTCAGATTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTATAATGCGTGTGGAGATTTTGCTAGCTGTAATAGTGAGGGTGGTGTAGCTTGCAAATGCCTGCCTGGTTTTGAACCTACCTCTCCAGGGAGTTGGAATACTGGAGATTATTCAGGTGGATGCATTAGGAAATCACCAATATGCAGTGCCAACGATGACAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCGGACTTCCAGTTTAATGCGAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCAGTGTCAGGCTTACTCATATTTGGAAGCTAATACGTCAAGGCAGGGTTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAGCTTGATAATGGCCGTGACCTCAATGTTCGAGTAGCAGTTAGAGATCTAGAATCAACTGTTAGAAACTGTGGAACATGTGGGACAAACCTCATTCCTTATCCACTTAGCACAGGACCTAAATGTGGTGACCCCATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTAAACTTTGAAGCAGCAGGTGGAACGTACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTTACATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAACCAAAGCCCTTCAGCTGAACCATTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCCGAGAATTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCAGTTGGGAGCCTCCGTTAGAGCCAACTTGTTCTTCTACCACGGACTGCAAAGACTGGCCTTATTCAACTTGCAACATGAGTAAAGATGGAAATAAAAGATGCCTTTGCATAGCAGACTTTCATTGGAATGGCTGGAGCTTGAATTGCACTACAGAGTCTCTTATTGATGTTTCCGTAGATCACAACAAAGGAAAGGATGGAAGAGGCAAAACGACCTTCTCTGTGATTATTGTTGCAACATCCATTTGTCTTGTCCTTCTGATGATTCTCTCATGTACTGTGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATTTAATGCTTCACTTGTACGACAATGAGAGACGTGTCAAAGACCTGATCGAATCGGGTCGATTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCAACAGAGAACTTCTCAAATGCAAATAAGCTTGGACAAGGAGGCTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTCTCAAGTGGTTCAGGACAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTGTTAATCGCGAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTACGAATATATGCCAAATAAAAGCTTAGACGCCTTTATATTTGATCAAAAGCTGAGTGTGGCATTGGATTGGGACATCCGCTTCAACGTCATTTTGGGAATTGCTCGTGGCCTTCTTTATTTACACCAAGATTCGAGGTTGAGAATTATTCATAGAGATTTGAAGACGAGCAACATTCTTCTAGATGAGGAGATGAATCCCAAAATATCCGACTTTGGCTTGGCGAGGATCTTTGGAGGGAAAGAAACTGCCACAAATACCAAAAGGGTGGTAGGCACTTATGGATACATGTCACCAGAATATGCATTGGATGGCATATTTTCTGTCAAATCTGACGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTAGTGGAAAAAGGAACACGGGATTCTATCACTTGGAGAAAGCTTTGAGTCTTCTAGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGATTTAATGGAGCAAACACTGAGGGGGAATTGCAAAAGAGATGAATATTTGAAGTGTTTAAATGTGGGGCTGTTGTGTGTGCAGGAAGATCCATGGGATCGACCCACCATGTCGAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCTCCGAAACCACCAGCTTTCGTCGTACGGCGGTGCCCCTCGAGCAGAGCTTCCTCCTCCACCAAACCAGAAACCTTCTCCCATAATGAGTTGACGGTCACCTTAAAAGATGGTAGATAG 3204 42.45 MNCTARWLCFVSGYRIAPSGPSKNVQSTKCLLVNGLIMWATGESDIFVLLLKPKRKDEWRKIEIEEREHVCCIAEVVKWWPKEVSRTWSPSAGLQSDERGDTLVSAGSRFELGFFKPYGSSHSRRYLGICPLAGSDGIFKIEDDGNLKVYDGNQNLYWSTNIGSSVLDRRTLKLLDNGNLVLSYADQEDLSEHILWQSFDYPTDTFLPGMLMDDNLVLTSWKSYDDPARGNFTFQLDQDGGQYVIWKRSVKFWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYIDTRLVLNSSGQLHYLNWEDHKVWSQIWVEPRDRCSVYNACGDFASCNSEGGVACKCLPGFEPTSPGSWNTGDYSGGCIRKSPICSANDDSDTFLSLKMMKAGNPDFQFNAKDDFDCKLECLNNCQCQAYSYLEANTSRQGSACWIWSGDLNNLQDELDNGRDLNVRVAVRDLESTVRNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVNFEAAGGTYKVKFIDSEARKFYIQTKEAGDCGDKNWITKALQLNHSSPFHVTSWCNFKETNPENFSLKTSNEVEISWEPPLEPTCSSTTDCKDWPYSTCNMSKDGNKRCLCIADFHWNGWSLNCTTESLIDVSVDHNKGKDGRGKTTFSVIIVATSICLVLLMILSCTVFYIYFSKTGLIERQESRGNSQKDLMLHLYDNERRVKDLIESGRFKEDDTNGIDIPFFDLETILIATENFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDIRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTKRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIISGKRNTGFYHLEKALSLLGYAWDLWMKDEGLDLMEQTLRGNCKRDEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLKDGR 1067
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1605511 1610269 - ClCG02G001470.1 Cla02g00149 266275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00149 1067 Pfam D-mannose binding lectin 131 216 IPR001480 -
Cla02g00149 1067 CDD B_lectin 100 202 IPR001480 -
Cla02g00149 1067 CDD PAN_AP_plant 381 465 - -
Cla02g00149 1067 MobiDBLite consensus disorder prediction 1042 1060 - -
Cla02g00149 1067 ProSiteProfiles PAN/Apple domain profile. 381 465 IPR003609 -
Cla02g00149 1067 SUPERFAMILY alpha-D-mannose-specific plant lectins 131 227 IPR036426 -
Cla02g00149 1067 SMART serkin_6 749 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00149 1067 SUPERFAMILY Protein kinase-like (PK-like) 733 1050 IPR011009 -
Cla02g00149 1067 Pfam Domain of unknown function (DUF3403) 1022 1067 IPR021820 GO:0004674
Cla02g00149 1067 Pfam S-locus glycoprotein domain 253 360 IPR000858 GO:0048544
Cla02g00149 1067 Gene3D Transferase(Phosphotransferase) domain 1 825 1027 - -
Cla02g00149 1067 SMART ntp_6 385 464 IPR003609 -
Cla02g00149 1067 MobiDBLite consensus disorder prediction 1042 1067 - -
Cla02g00149 1067 Pfam PAN-like domain 381 449 IPR003609 -
Cla02g00149 1067 Gene3D - 92 199 IPR036426 -
Cla02g00149 1067 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 91 1064 - -
Cla02g00149 1067 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 91 1064 - -
Cla02g00149 1067 Gene3D Phosphorylase Kinase; domain 1 714 824 - -
Cla02g00149 1067 Pfam Protein tyrosine and serine/threonine kinase 752 1018 IPR001245 GO:0004672|GO:0006468
Cla02g00149 1067 SMART blect_4 94 202 IPR001480 -
Cla02g00149 1067 ProSiteProfiles Protein kinase domain profile. 749 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00149 1067 ProSiteProfiles Bulb-type lectin domain profile. 79 195 IPR001480 -
Cla02g00149 1067 CDD STKc_IRAK 755 1020 - -
Cla02g00149 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00149 Cla-Chr2:1605511 Cla02g01105 Cla-Chr2:23537307 0 dispersed
Cla04g01088 Cla-Chr4:26057763 Cla02g00149 Cla-Chr2:1605511 5.10E-09 dispersed
Cla02g00149 Cla-Chr2:1605511 Cla05g01568 Cla-Chr5:26537136 1.61E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80320 PF07714 PK_Tyr_Ser-Thr 2.10E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00149 - - csv:101217751 1887.46