Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00173 | ATGGAGCTCTTTCGTTGTCTTGTCTTTCTAATTGTATGTGTTTCAGGACTTGCTAGCTCAAGCCAAGCTCAGCTAGAGCTTGACTACTATGGAAAGAGCTGCCCTCGTGCTGAGAAAATCGTCTATGATTACGTTTACAAGAACATTCCCAAGGTTCCTACCTTGGCTTCTGCCTTACTTAGAATGCATTTCCACGACTGCTTCGTTCGGGGTTGTGATGCATCTGTACTCTTGAACTCAACTACGAACAACCAAAGTGAGAAAGTATCTCCACCAAATCTAACACTGAGAGGCTTCGACTTCATTGATAAAATTAAGAAACTTTTGGAAGCTGAATGCCCTGGAGTCGTCTCCTGCGCCGACATTATTTCTTTAGTTGCAAGAGACTCCGTCGTTGCTATCGGCGGTCCATTCTGGAGGGTTCCGACCGGAAGGAGAGATGGTTTGATCTCAAGATCCACAGAAGCTTTGGTGAACATTCCTCCACCGTTTGCCAATTTGTCAACTCTACAACAACAATTCGCTAACAAGGGTCTTGATCTCAAAGACTTGGTTTTGCTTTCAGGAGCGCACACAATTGGGGTATCTCACTGCTCGTCCTTTACGCGGCGGCTCTACAACTTCACCGGCGTGGGAGATCAAGACCCATCACTTGACAGTCAGTACGCCGCAAATCTCAAGGCAAACAAATGCAAAAGCATTAGCGCCAACGGCATTGTGGAAATGGACCCTGGCAGTTTCAAAACCTTCGATCTCAGCTACTACTCCCTTCTTCTGAAGCGCCGAGGGCTGTTCCAGTCCGACGCGGCTCTGACCACCAGCGCAGCCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCCGTTCAGAACTTTTTCGCCCAGTTTGGGTTAGCCATGGAGAAGATGGGTCGCATAGGGGTCAAGACTGGGTCCGAGGCTCAGAAAGTTCAGCTCTCGCAATTGACAAGCCATCGAATCTGTTCTATTCTATTATTTTTGCACATTTTCCGATTTTTGGCAATCTTTTTATGTGTTCTTTATCAGAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGGTTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCGACATGGACCTCGTGTTGCAGAGTATAGCTCATCTTGGTCACTTGAACGACATAGTGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATCCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTTGTTTACTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTAGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTACATAAAGAGAGGCAGGAGTGTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGATCGCAAGTCCGACTTCAACAGTTGGGAGATCAGCTGGGGCCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATACGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGTAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAAGCGGTCGGCAGTGAAATCAGTGATCTGATACCTGCAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCGGCCTGCCTTTCTTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAA | 2286 | 46.02 | MELFRCLVFLIVCVSGLASSSQAQLELDYYGKSCPRAEKIVYDYVYKNIPKVPTLASALLRMHFHDCFVRGCDASVLLNSTTNNQSEKVSPPNLTLRGFDFIDKIKKLLEAECPGVVSCADIISLVARDSVVAIGGPFWRVPTGRRDGLISRSTEALVNIPPPFANLSTLQQQFANKGLDLKDLVLLSGAHTIGVSHCSSFTRRLYNFTGVGDQDPSLDSQYAANLKANKCKSISANGIVEMDPGSFKTFDLSYYSLLLKRRGLFQSDAALTTSAATKAFVTDLLNGSVQNFFAQFGLAMEKMGRIGVKTGSEAQKVQLSQLTSHRICSILLFLHIFRFLAIFLCVLYQKGHCSRPSCSFAHGNAELRRFAGGSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPRVAEYSSSWSLERHSDRKRRKKELGDPRRDYSGNLRISDRNEEEDREGKTLFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLHKERQECRRIKSKIKKFVKAHNRYSRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHTSGPFHDLQKDTSVSKRKMHAVQDTAENSNRADLNKGNKEAVVRRISRWNAHPAKSVYSKIEAVGSEISDLIPAANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGGLPFFPPPPPPPIREFNHSRYEGEDQNVDVEVVDDEREGMDDA | 761 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1780905 | 1790658 | - | ClCG02G001780.2 | Cla02g00173 | 266299 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00173 | 761 | Coils | Coil | 490 | 524 | - | - | |
Cla02g00173 | 761 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 332 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | CDD | secretory_peroxidase | 24 | 313 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g00173 | 761 | Gene3D | Peroxidase, domain 2 | 161 | 303 | - | - | |
Cla02g00173 | 761 | Pfam | Peroxidase | 49 | 283 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | MobiDBLite | consensus disorder prediction | 702 | 761 | - | - | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 298 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 241 | 256 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 257 | 274 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Plant peroxidase signature | 182 | 194 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PANTHER | PEROXIDASE 25-RELATED | 9 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | MobiDBLite | consensus disorder prediction | 374 | 456 | - | - | |
Cla02g00173 | 761 | Gene3D | - | 29 | 315 | - | - | |
Cla02g00173 | 761 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Haem peroxidase superfamily signature | 243 | 258 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | MobiDBLite | consensus disorder prediction | 746 | 761 | - | - | |
Cla02g00173 | 761 | MobiDBLite | consensus disorder prediction | 380 | 407 | - | - | |
Cla02g00173 | 761 | PANTHER | PEROXIDASE | 9 | 314 | - | - | |
Cla02g00173 | 761 | Coils | Coil | 462 | 482 | - | - | |
Cla02g00173 | 761 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cla02g00173 | 761 | ProSiteProfiles | Zinc finger C3H1-type profile. | 344 | 365 | IPR000571 | GO:0046872 | |
Cla02g00173 | 761 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 315 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00173 | 761 | MobiDBLite | consensus disorder prediction | 417 | 456 | - | - | |
Cla02g00173 | 761 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 183 | 193 | IPR019793 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00173 | Cla-Chr2:1780905 | Cla06g00517 | Cla-Chr6:6258343 | 1.02E-94 | dispersed | |
Cla02g00173 | Cla-Chr2:1780905 | Cla02g00175 | Cla-Chr2:1795194 | 3.77E-47 | proximal | |
Cla02g00173 | Cla-Chr2:1780905 | Cla02g00824 | Cla-Chr2:10994851 | 5.29E-155 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60572 | PF00141 | peroxidase | 1.70E-73 | CL0617 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00173 | K00430 | - | csv:101222960 | 672.544 |