Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00175 | ATGGCCATTGGTCCAAAGTTTTTCTTCCTTTTCTTTATGAAGTTAATACTTGTATCATCTCTCTCAAATATTGTGGAAGCGCAAAATTTGACAGTCAGATTTTACCAGGATAGCTGTCCTGGAGTGGAGTATACTGTTGCCAAAACGGGTTGTGATGGTTCTGTGCTGCTAAATTCTACAACAAACAACCAAGCTGAGAAAGATGCATTTCCCAACCTTAGTTTAAGAGGTTTCAATGTCATTGACGCTGTTAAAGTTGCCGTCGAAAAGCAATGTCCCGGTGTCGTTTCTTGTGCTGATATCCTCGCTTTAATAGCTCGTGACGCAGTTAGAATGGAAGAAGAGACGGAAGAGTATCGATCTCCAGAGAAGCGATCACACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCTAAACTAGACAAATACTACGCCATCGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTTGATCAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACCAAAGCCTACATTCTGCTTCAGGCCAGTACACGTGGAGCTACTTTCGCGGCTGATTTCGCCGAATCCATGGTGAATATGGGGAATATCGGCGTCCTCACCGGCACTGACGGCGAAATTAGGCGGCGATATCGCGTGAGGAACACGTGCGGTCGTGATTTTATCTTTGGTTATCTCCTAATGCTTGTATCATCTTTTTCGAACATCGTTGGAGCAAAAAAATTGACGGTCGGATTTTATCAGGGTAGCTGCCCGGGGGTGGAGTATATTGTTGCCAAAACAGTAGCTCAATATATTAAGAAACAACCAACTCTTGCTGCTTCTTTGTTGAGAATACACTTCCATGACTGCTTTGTTAGGGGTTGTGATGGTTCTGTGCTATTAAATTCCAAGCCAAACAACCAAGCTGAGAAAGATTCTTTTCCCAACCTTAGTTTAAGAGGTTTTAATGTCGTTGACGCTGTTAAAGCTGCTGTCGAAAAGCAATGCCCCAGTATCGTTTCTTGTGCTGATATTCTCGCTTTGATAGCTCGCGACGCCGTTAGAATGATTGGAGGGCCGCTGTGGGAAGTTCCAACAGGAAGAAGAGATGGAAGAGTATCCATCTCCAGAGAAGTGTTGATCAATTTGCCGCCTCCCTTCGCTAATATCTCTTCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTTTCTGTCAAAGATCTGGTTGTTTTATCCGGATCACACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGTCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCTAAACTAGACAAATACTACGTCGTTGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCTGCTCTTCTCGACGATCCTGATACCAAAGCTTACGTACTGCTTCAGGCAAGTACACGTGGCGCTAGTTTCGCCACCGATTTCGCTAAATCCATGGTGAATATGGGGAATATCGGTGTCCTCACCGGCACCGACGGTGAAATTAGGCGGCGATGTGCTTTTGTTAATTGA | 1755 | 45.7 | MAIGPKFFFLFFMKLILVSSLSNIVEAQNLTVRFYQDSCPGVEYTVAKTGCDGSVLLNSTTNNQAEKDAFPNLSLRGFNVIDAVKVAVEKQCPGVVSCADILALIARDAVRMEEETEEYRSPEKRSHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAIALKNKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYILLQASTRGATFAADFAESMVNMGNIGVLTGTDGEIRRRYRVRNTCGRDFIFGYLLMLVSSFSNIVGAKKLTVGFYQGSCPGVEYIVAKTVAQYIKKQPTLAASLLRIHFHDCFVRGCDGSVLLNSKPNNQAEKDSFPNLSLRGFNVVDAVKAAVEKQCPSIVSCADILALIARDAVRMIGGPLWEVPTGRRDGRVSISREVLINLPPPFANISSLKTSFLSKGLSVKDLVVLSGSHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYVVALKNKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYVLLQASTRGASFATDFAKSMVNMGNIGVLTGTDGEIRRRCAFVN | 584 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1795194 | 1806009 | - | ClCG02G001790.2 | Cla02g00175 | 266301 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00175 | 584 | CDD | secretory_peroxidase | 29 | 257 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g00175 | 584 | Gene3D | Peroxidase, domain 2 | 118 | 238 | - | - | |
Cla02g00175 | 584 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 259 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | ProSitePatterns | Peroxidases active site signature. | 317 | 328 | IPR019794 | GO:0004601 | |
Cla02g00175 | 584 | SUPERFAMILY | Heme-dependent peroxidases | 286 | 584 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | Gene3D | - | 289 | 584 | - | - | |
Cla02g00175 | 584 | Gene3D | Peroxidase, domain 2 | 422 | 563 | - | - | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE 25-RELATED | 126 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE 25-RELATED | 49 | 112 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE 25-RELATED | 268 | 583 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 444 | 454 | IPR019793 | - | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 295 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 319 | 339 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 358 | 371 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 377 | 387 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 396 | 411 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 443 | 455 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 501 | 516 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 517 | 534 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Plant peroxidase signature | 558 | 571 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Haem peroxidase superfamily signature | 317 | 331 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Haem peroxidase superfamily signature | 378 | 395 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Haem peroxidase superfamily signature | 396 | 408 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Haem peroxidase superfamily signature | 444 | 459 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PRINTS | Haem peroxidase superfamily signature | 503 | 518 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE | 126 | 255 | - | - | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE | 49 | 112 | - | - | |
Cla02g00175 | 584 | PANTHER | PEROXIDASE | 268 | 583 | - | - | |
Cla02g00175 | 584 | CDD | secretory_peroxidase | 285 | 583 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g00175 | 584 | Gene3D | - | 19 | 117 | - | - | |
Cla02g00175 | 584 | Pfam | Peroxidase | 33 | 112 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | Pfam | Peroxidase | 302 | 544 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | Pfam | Peroxidase | 127 | 216 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | ProSiteProfiles | Plant heme peroxidase family profile. | 285 | 584 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g00175 | 584 | ProSiteProfiles | Plant heme peroxidase family profile. | 50 | 259 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00175 | Cla-Chr2:1795194 | Cla09g00439 | Cla-Chr9:4162682 | 1.12E-39 | dispersed | |
Cla03g00385 | Cla-Chr3:4437906 | Cla02g00175 | Cla-Chr2:1795194 | 2.89E-33 | dispersed | |
Cla05g00838 | Cla-Chr5:8305976 | Cla02g00175 | Cla-Chr2:1795194 | 6.88E-42 | dispersed | |
Cla08g01404 | Cla-Chr8:26939999 | Cla02g00175 | Cla-Chr2:1795194 | 8.78E-40 | dispersed | |
Cla09g01499 | Cla-Chr9:29203688 | Cla02g00175 | Cla-Chr2:1795194 | 1.81E-39 | dispersed | |
Cla09g01501 | Cla-Chr9:29238210 | Cla02g00175 | Cla-Chr2:1795194 | 3.66E-35 | dispersed | |
Cla02g00173 | Cla-Chr2:1780905 | Cla02g00175 | Cla-Chr2:1795194 | 3.77E-47 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00175 | K00430 | - | csv:101219177 | 553.518 |