Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00209 ATGGAAGTGATAAATGGCACAATAGATGCATACAAGAGAGAGGAAGAGCCAAAAATTGGCATTTCCAATATTACCGCCGTCACTACTAGACCGGTGGTAGAAGACAGTTGTTCTGACGACCCAAATTTTCTGCCAAAAATCTTCTTCGCGAAGAGCCCGCGAGAATTTTTCAACCATTCGGCAACTTCACAGTCCTTTGATCAAACAACAAATCAGCACACGAAGCTTCATCCCAATTGGATACTAATTCAATTCCATTCCCATATTAAAAATGTAAGCCGTCGTGTTTTACCAGCTCTAGAATTGCTCATTTCCAACCCAGTGAAAAATATCAAGTTGAACCCTCAATTTTCAGTCAACGGGGTCCTCTGTACACGGCAAAGCAACCAGGTGCTCAATTGGAAGCGAAATTTGGTTCATCTCTTCTTAGAATCCTGTTTTCTCATCTGGGTCTTCCTCGTTTTGGTCGATTTTGGGGTTTGTTTAGTCCAAATGAGCCCTCGATTTGGGTTTTTGTTGTTGTTTTTGTTCTCTGTTTTACTGGGAGCTGATTCAAAGTGCCCTAGAACATGCGATGTAGCTTTAGGTTCGTACTTTGTGTGGGAGGGTAGTACTTTGTCTCTCATCTCTCAAATGTTTCGGTTGCCGTCTCCTGATATAATCGTCAGCTACAATAGAGATAAAATTCCCAACAAAGACAGTGTTAATAGCGGCATCAGAATCAACGTTCCATTCTCCTGTGACTGTATTAGCGATACGTTTCTGGGTCATACGTTTCAGTACCAGATTAATAGTGGAGATACTTACAGTGAAATTGCGACCAAATTCTATTCGAACCTGACTACGGTGGACATGTTACAAAAATTCAATAATTTTGATGTTCTTAATCTTCCTCCAAATGGTATTTTGAATGTGGTAGTGAACTGCTCCTGTGGGAATCCTGATGTTTCCAAGACATATGGGCTGTTTGTCACTTACCCAATTCGATCCGATGATAGTTGGGATAAGTTGCAAACAGATACAAATGTCAGCTTGTCTTTGCTGCAGCAGTACAATCAGGGTGTGAATTTCAGCCCAGGGAATTTGATCTTTATTCCAGGCAGAGGACTTGCAGGTGGAGCCATTGCAGGCATAATTATAGGCGCAGTACTTGGGGTTCTACTTGTAGCAGGTGTCATTTACATTGTCATTCGAAGGAGAAAGTTGAAAAGTTCTAAATTGCTGGCGTTCTCCCAAGAACTGTCTTCTCAAGATGGGCGCGCTCTTGCCCCTGGAAGTTCGTTAGATAAATCTACTGAATCAAATGGTCAAGGTGGTGGTATAGCTGCCGTTACCGGTATTACTGTGGACAAATCAGTGGATTTCTCATATGAAGAGCTTGCCAAGGCCACGGACAACTTTAGCTTGGCTAACAAAATCGGTGAAGGTGGTTTCGGATCGGTTTACTATGCAGAACTCAGAGGAGAGAAAGCTGCAATAAAGAAGATGGACATGCAAGCTTCAAGGGAGTTCCTTGCAGAAATTAAGGTTCTAACACGCGTTCACCACTTGAACTTGGTGCGCTTGATAGGATATTGTGTTGAGAATTCTCTATTCCTAGTCTATGAGTACATTGAGAATGGCAACTTGAGCCAACATTTACGTGGCACTGGTCGGGATCCATTGCCGTGGCCTTCTAGGGTCCAAATAGCCCTCGATTCAGCTCGTGGCCTTGAGTATATCCATGAGCACACTGTTCCCGTTTATATTCATCGTGATATTAAATCCGCCAACATATTGATTGACAAAAATTTTCATGGAAAGGTTGCAGACTTTGGGCTAACCAAGTTAACTGAAGTTGGAAATTCTTCGCTTCCTACTCGTCTTGTGGGCACATTTGGATATATGCCACCCGAATATGCACAGTACGGTGATGTTTCTCCAAAGATAGATGTATATGCTTTTGGTGTTGTTCTTTATGAGCTTATTTCAGCCAAGGAAGCTGTGGTTAAGACGAACAAACCCAGTGCAATCAATGAATCAAAAGGCCTTTTTGAAGATGTCCTGAATCAACCCGACGCAAAAGAGAACCTTCACAAACTAGTCGACCCAAGACTCGAAGAGAACTACCCTCTCGATTCGGTTTTCAAGATGGCTCAACTTGCCAAGGCATGTACACATGAGAATCCACAGCTACGGCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCTGCGACAGAGGATTGGGACGTCGGCTCTTTCTATGAAAACCAAGCTCTCGTAAACTTGATGTCGGGAAGGTAG 2295 42.96 MEVINGTIDAYKREEEPKIGISNITAVTTRPVVEDSCSDDPNFLPKIFFAKSPREFFNHSATSQSFDQTTNQHTKLHPNWILIQFHSHIKNVSRRVLPALELLISNPVKNIKLNPQFSVNGVLCTRQSNQVLNWKRNLVHLFLESCFLIWVFLVLVDFGVCLVQMSPRFGFLLLFLFSVLLGADSKCPRTCDVALGSYFVWEGSTLSLISQMFRLPSPDIIVSYNRDKIPNKDSVNSGIRINVPFSCDCISDTFLGHTFQYQINSGDTYSEIATKFYSNLTTVDMLQKFNNFDVLNLPPNGILNVVVNCSCGNPDVSKTYGLFVTYPIRSDDSWDKLQTDTNVSLSLLQQYNQGVNFSPGNLIFIPGRGLAGGAIAGIIIGAVLGVLLVAGVIYIVIRRRKLKSSKLLAFSQELSSQDGRALAPGSSLDKSTESNGQGGGIAAVTGITVDKSVDFSYEELAKATDNFSLANKIGEGGFGSVYYAELRGEKAAIKKMDMQASREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEYIENGNLSQHLRGTGRDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNKPSAINESKGLFEDVLNQPDAKENLHKLVDPRLEENYPLDSVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2179462 2186493 - ClCG02G002120.2 Cla02g00209 266335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00209 764 ProSiteProfiles Protein kinase domain profile. 467 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00209 764 SMART serkin_6 467 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00209 764 SUPERFAMILY Protein kinase-like (PK-like) 451 736 IPR011009 -
Cla02g00209 764 Gene3D Phosphorylase Kinase; domain 1 453 537 - -
Cla02g00209 764 Pfam LysM domain 261 299 IPR018392 -
Cla02g00209 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Cla02g00209 764 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 169 764 - -
Cla02g00209 764 Gene3D Transferase(Phosphotransferase) domain 1 538 755 - -
Cla02g00209 764 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 169 764 IPR044812 GO:0019199|GO:0045087
Cla02g00209 764 CDD STKc_IRAK 473 733 - -
Cla02g00209 764 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Cla02g00209 764 Pfam Protein tyrosine and serine/threonine kinase 469 735 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00209 Cla-Chr2:2179462 Cla05g02574 Cla-Chr5:36971065 7.58E-94 dispersed
Cla08g01520 Cla-Chr8:27975392 Cla02g00209 Cla-Chr2:2179462 1.05E-57 dispersed
Cla02g00209 Cla-Chr2:2179462 Cla11g00221 Cla-Chr11:2548037 6.18E-72 transposed
Cla02g00209 Cla-Chr2:2179462 Cla05g02353 Cla-Chr5:35102124 1.77E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80322 PF07714 PK_Tyr_Ser-Thr 7.70E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00209 - K13429 csv:101203576 1038.48