Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00218 | ATGGCACAGTTGCCACCCAAAATCCCAAATATGACGCCTAATTGGCCCGACTTTTCCCGGCAGAAAATCCCTTCAATGGAAACCTTTGCACCGCCCACCACCACGCCGGCGGTTACTCAAAATAATCCTTCTTGGGTCGATGAATTTCTCGATTTTTCTTCTGCTAGACGTGGATCCCACCGTCGGTCTGTTAGTGATTCCATCACATTCCTCGAAATGCCAATGCTCGAGGAAGATTGCCGGACTGCCGCTGCTGCACCGCCCCCGCCGCCCCCGGGATCCGGTGACCGGAATGAATTTGATAGATTCGATGACGAGCAATTCCTGTCGATGTTTAACGATGAAATCTCCGCCGCCGTCGCTCCCACCTTGTCGTCGTCGAACCCCTCCACGCCGTCGGATCATAATAGTATTAACGACGAGAAAGACGCCCAAAACGACGGTAAGCAAAATCAGAACAAAAACGAATCCGACGAAGTACAGAGCCAACAGCAATCGGAAAACCAAACACAATCCAATTCCATGGCGACGGCGGCAACGGCGGCTTCCACTGATCGGATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCACAAAGATCACGAGTAAGGAAGCTTCAATACATATCAGAACTCGAACGAAGCGTTACATCGTTACAGGCTGAAGTATCGGTGCTATCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTTAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGATAAGATTTTTAAAGATGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGACTAAGACAAGTATATCACCAACAAAACATTAAGAAGATGGAAAACAATGCAGCACCATCACCGGCGATTACTCCGTCCCGACCCGTCACCTCACCATCACCGGCGATTACTCCGTCCCGACCCGTCACCGCCATCGCCACAGATGCCAAACTTCCTAACATAGATCAAAACGAGCAAGTTCCGAACATCGTCGTTTAG | 1035 | 49.95 | MAQLPPKIPNMTPNWPDFSRQKIPSMETFAPPTTTPAVTQNNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDCRTAAAAPPPPPPGSGDRNEFDRFDDEQFLSMFNDEISAAVAPTLSSSNPSTPSDHNSINDEKDAQNDGKQNQNKNESDEVQSQQQSENQTQSNSMATAATAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMENNAAPSPAITPSRPVTSPSPAITPSRPVTAIATDAKLPNIDQNEQVPNIVV | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2272540 | 2275857 | - | ClCG02G002210.1 | Cla02g00218 | 266344 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00218 | 344 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 1 | 303 | - | - | |
Cla02g00218 | 344 | Coils | Coil | 270 | 290 | - | - | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 293 | 320 | - | - | |
Cla02g00218 | 344 | Gene3D | - | 190 | 262 | - | - | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 155 | 184 | - | - | |
Cla02g00218 | 344 | SMART | brlzneu | 187 | 251 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cla02g00218 | 344 | PANTHER | BASIC LEUCINE ZIPPER 34 | 1 | 303 | - | - | |
Cla02g00218 | 344 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 194 | 209 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 122 | 193 | - | - | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 79 | 101 | - | - | |
Cla02g00218 | 344 | CDD | bZIP_plant_RF2 | 192 | 242 | IPR044759 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | Pfam | bZIP transcription factor | 191 | 235 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 189 | 241 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | SUPERFAMILY | Leucine zipper domain | 191 | 245 | IPR046347 | GO:0003700|GO:0006355 | |
Cla02g00218 | 344 | MobiDBLite | consensus disorder prediction | 136 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00218 | Cla-Chr2:2272540 | Cla11g01727 | Cla-Chr11:30892573 | 3.51E-110 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60579 | PF07716 | bZIP_2 | 4.20E-09 | CL0018 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00218 | - | - | csv:101205276 | 532.332 |