Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00229 ATGCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTCCATTGGTTTGTTCCCTCAATCAAGAAGGACTATATCTTCAGCGAGTCAAACTCGGTCTCTCCGATCCCACTCACTCCCTCTCTTCATGGAACCCACGCGACGACACTCCCTGCAACTGGTCCGGCGTTACTTGCGATTCCGTTACTCGTTCTGTTATCGCCCTCGACCTCTCCGATTTTCAGATCGCCGGACAGTTTCCCACTTTCGTTTGTCGTCTTCCTTCTCTTTCTTCACTATCTCTTTCCAATAACGCTATTAACGCTTCTCTTCCTGACGATGTCGCTTCCTGTTCTAGCCTCCAGTGGCTTAACTTGTCTCAGAATCTTCTTGCTGGTTCTATTCCCGATGCGATTTCCAAGATCTCGAATCTTCGCTCACTGGATCTCTCTGGAAACAACTTTTCCGGGGAGATTCCGACCAGTTTCGGTGGGTTTCAGCGACTTGAGACGCTGAATTTAGTTGATAATCTTTTGGATGGAACTATTCCGGGGAGTTTGGGTAACATTTCGAGTTTGAAAGAGCTTCAACTCGCTTACAATCCGTTTACGCGGAGTGAGATACCGAGTGCATTCGGGAACTTGACGAACCTGGAGGTTCTCTGGCTTGCTAACTGTAATCTTGTCGGTCAGATTCCGGCAACTGTTGGCCGGATGACTCGGCTTACGAATCTTGACTTGTCCAATAATAGACTTAGTGGGTCGATTCCGGTTTCACTCACTCAAATGAAAAGTTTAGTTCAAATTGAACTATTTAACAACTCGCTCTCCGGGGAGTTGCCTTTGGGACTGTCTAATTTAACTGCACTTCGAAGAATTGATGTGTCGATGAATCACTTGACTGGAACAATTCCGGATGAACTGTGTGCATTACAGCTTGAGTCGCTAAATTTGTTCGAGAATCGATTGGAAGGGCCTTTGCCGGAGAGTGTCGTTAATTCCCCTTACTTGAATGAGCTCAAATTGTTTAACAACAAGCTTAGTGGACAGTTACCGAGTAAACTCGGCCAAAACTCGCCATTAGTGCATCTTGATGTTTCATACAACGGATTTTCTGGCGGAATCCCTGAAAACTTGTGTGCAAAAGGGACATTGGAAGAACTTATATTGATTTACAATTCGTTTTCCGGAAGAATCCCGGCAAGTCTTGGAAAATGCAGCAGCTTAAGCCGGATTCGAATGAGGAACAACAGACTCTCGGGTGCGGTTCCTGATGAATTCTGGGGTCTGCCCAATGTCTATTTGCTTGAGCTCGTTGAGAATTCTCTTTCTGGGTCTATTTCTTCGATGATATCTAGCGCTAAGAATCTCTCTATTTTGATGATCTCAGAAAATCAATTTTCAGGGTTAATTCCTTCCGAGATTGGATCGTTAAGCAATCTGACTGAACTTTCAGGTAGTGACAATATGTTTTCCGGTCGAATCCCGGGAACTTTGGTAAAGTTAAACTTGTTGAGTACACTCGATCTAAGCAAGAACAAGCTTTCTGGTGAATTGCCAATGGGAATTGGAGCTTTGAAAAGGCTAAACGAGTTAAATTTAGCAAACAACAGGCTATCTGGCAATATCCCGAGTGAAATTGGAAGCCTACCTGTGCTTAATTATCTCGATCTTTCAAGTAACCATCTCAGTGGAAGTATACCCCTTGAATTGCAGAATTTGAAACTGAATTCGTTAAATCTGTCGAACAATCGGTTATCAGGAGTACTTCCTCCTCTTTATGCAGAGGATATTTACAGAGATAGCTTTCTGGGTAATCCAGGTTTGTGCAATAACGACCCAAGTCTTTGTCCTCATGTTGGAAAAGGCAAAAACCAAGGCTATTGGCTTCTCAGATCCATTTTTCTACTTGCTATCATTGTTTTTTTTGTTGGGGTCATTTGGTTTTTCTTGAAGTACAAGGAATTCAAGAAGAGTAAAAAAGGAATTGCCATGTCCAAGTGGAAATCATTTCATAAGCATGGTTTTAGTGAATATGAAATAGCAGATTGCCTCAGTGAAGACAAAGTCATTGGAAGTGGAGCATCTGGCAAAGTGTACAAAGTTGTGCTAAAAAACGGCGAGATCGTGGCGGTGAAGAAGCTATGGCAAGGAGCAAGAAAAGAGGACACAAGTTTGGATTCAGAGAAAGATGGATTTGAAGCTGAAGTTGAGACTTTAGGGAAGATCCGTCACAAGAATATTGTAAGGTTATGGTGCTGCTGCAACACAGGCAACTGCAAGCTGCTTGTTTATGAGTACATGCCTAATGGAAGCTTGGGAGATTTGTTGCACGGCAGCAAAAAGCGCTTTCTGGATTGGCCTACAAGGTATAAAGTAGTTTTGGATGCAGCTGAAGGGCTTTCTTACTTGCATCACGACTGTGCTCCTCCAATTGTTCATAGGGATATTAAATCCAACAATATATTGCTTGATTCTGAGTTTGGAGCTAGAGTTGCTGACTTTGGATTGGCAAAGTTTTTGAACGCTGGCAAGGGATCAGAATCGATGTCTGTCATTGCCGGTTCTTGTGGTTATATTGCACCAGAATATGCTTATACTTTAAGAGTAAACGAAAAGAGTGACATCTACAGCTTTGGGGTGGTGATTTTAGAGCTAGTGACAGGGCGGCCTCCAAATGATCCAGAATTTGGGGATAGAGACTTGACAAAGTGGGTCTATGCCACCGTCGACGGTAGAGGACTCGATCGAGTGATTGATCCGAAACTCGGTTCTGAATACAAGGAAGAAATATACAGAGTCCTTGACGTGGGACTGCTTTGCACAAGCTCACTTCCCATCAACCGCCCTTCAATGAGACGAGTCGTTAAACTGCTGCAGGAGGCTGCCACAGAAACCAGACCCGCCATTGTTAAAAGGGAACCCAAACTTTCTCCATATTTCTCCTAG 2943 43.49 MPSLLLLLLLLLLLLLLSSPLVCSLNQEGLYLQRVKLGLSDPTHSLSSWNPRDDTPCNWSGVTCDSVTRSVIALDLSDFQIAGQFPTFVCRLPSLSSLSLSNNAINASLPDDVASCSSLQWLNLSQNLLAGSIPDAISKISNLRSLDLSGNNFSGEIPTSFGGFQRLETLNLVDNLLDGTIPGSLGNISSLKELQLAYNPFTRSEIPSAFGNLTNLEVLWLANCNLVGQIPATVGRMTRLTNLDLSNNRLSGSIPVSLTQMKSLVQIELFNNSLSGELPLGLSNLTALRRIDVSMNHLTGTIPDELCALQLESLNLFENRLEGPLPESVVNSPYLNELKLFNNKLSGQLPSKLGQNSPLVHLDVSYNGFSGGIPENLCAKGTLEELILIYNSFSGRIPASLGKCSSLSRIRMRNNRLSGAVPDEFWGLPNVYLLELVENSLSGSISSMISSAKNLSILMISENQFSGLIPSEIGSLSNLTELSGSDNMFSGRIPGTLVKLNLLSTLDLSKNKLSGELPMGIGALKRLNELNLANNRLSGNIPSEIGSLPVLNYLDLSSNHLSGSIPLELQNLKLNSLNLSNNRLSGVLPPLYAEDIYRDSFLGNPGLCNNDPSLCPHVGKGKNQGYWLLRSIFLLAIIVFFVGVIWFFLKYKEFKKSKKGIAMSKWKSFHKHGFSEYEIADCLSEDKVIGSGASGKVYKVVLKNGEIVAVKKLWQGARKEDTSLDSEKDGFEAEVETLGKIRHKNIVRLWCCCNTGNCKLLVYEYMPNGSLGDLLHGSKKRFLDWPTRYKVVLDAAEGLSYLHHDCAPPIVHRDIKSNNILLDSEFGARVADFGLAKFLNAGKGSESMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPNDPEFGDRDLTKWVYATVDGRGLDRVIDPKLGSEYKEEIYRVLDVGLLCTSSLPINRPSMRRVVKLLQEAATETRPAIVKREPKLSPYFS 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2383335 2386564 - ClCG02G002320.2 Cla02g00229 266355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00229 980 Gene3D Ribonuclease Inhibitor 24 202 IPR032675 -
Cla02g00229 980 Gene3D Ribonuclease Inhibitor 269 618 IPR032675 -
Cla02g00229 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Cla02g00229 980 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 8 976 - -
Cla02g00229 980 SMART LRR_typ_2 237 261 IPR003591 -
Cla02g00229 980 SMART LRR_typ_2 524 548 IPR003591 -
Cla02g00229 980 SMART LRR_typ_2 92 116 IPR003591 -
Cla02g00229 980 SMART LRR_typ_2 140 163 IPR003591 -
Cla02g00229 980 SMART LRR_typ_2 188 212 IPR003591 -
Cla02g00229 980 SMART LRR_typ_2 285 309 IPR003591 -
Cla02g00229 980 ProSiteProfiles Protein kinase domain profile. 683 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00229 980 Pfam Protein kinase domain 685 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00229 980 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Cla02g00229 980 SUPERFAMILY L domain-like 359 609 - -
Cla02g00229 980 Pfam Leucine rich repeat 93 153 IPR001611 GO:0005515
Cla02g00229 980 Gene3D Phosphorylase Kinase; domain 1 665 765 - -
Cla02g00229 980 Gene3D Ribonuclease Inhibitor 203 263 IPR032675 -
Cla02g00229 980 ProSiteProfiles Leucine-rich repeat profile. 239 261 IPR001611 GO:0005515
Cla02g00229 980 SUPERFAMILY Protein kinase-like (PK-like) 676 957 IPR011009 -
Cla02g00229 980 Gene3D Transferase(Phosphotransferase) domain 1 766 974 - -
Cla02g00229 980 PRINTS Leucine-rich repeat signature 240 253 - -
Cla02g00229 980 PRINTS Leucine-rich repeat signature 548 561 - -
Cla02g00229 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 976 - -
Cla02g00229 980 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Cla02g00229 980 SUPERFAMILY RNI-like 74 418 - -
Cla02g00229 980 SMART serkin_6 683 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01761 Cla-Chr1:32517304 Cla02g00229 Cla-Chr2:2383335 0 dispersed
Cla01g02278 Cla-Chr1:36660917 Cla02g00229 Cla-Chr2:2383335 0 dispersed
Cla02g00229 Cla-Chr2:2383335 Cla10g00774 Cla-Chr10:14594346 0 dispersed
Cla11g01457 Cla-Chr11:28242619 Cla02g00229 Cla-Chr2:2383335 0 dispersed
Cla02g00229 Cla-Chr2:2383335 Cla03g00748 Cla-Chr3:9083328 1.46E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80323 PF00069 Pkinase 1.40E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00229 - - csv:101208240 1720.29