Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00312 | ATGCGTACACTTGATGTACGGAAGCAGAACACGCGAATGTTCTTGAAAAAGAAAGAAGAAAACCATGAAACAAATTCTTCTTCATCATCTTCTTCTTCTTCTTCTCCTTCCCTTCATACTTCTCACTCCCACTCCTATGTTGTCTACATGGGAGCTCATTCCCATGGCGGTCGAAAACCGGCCAATATCATCACCGATTCTCACCACGAATTCCTCCGACCGTTTCTCGAAAGTGAAGAGGAGTTTACCGGAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCCGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCTAAGGGAAAGATTCTCGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTATTGGCTGGTGCCATGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACACGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTTCCTGAGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAATGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCTTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCCGGAACGTACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGGACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGAAGAACTATGTATACGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGAAGACCACGACGACTCTAGTTCGAGTCCTCTTTGTGCTCTTTAAGGTTGTTTGGCTCACGTTCAATCAAAGACTTCTGGAATAA | 2337 | 46.04 | MRTLDVRKQNTRMFLKKKEENHETNSSSSSSSSSSPSLHTSHSHSYVVYMGAHSHGGRKPANIITDSHHEFLRPFLESEEEFTGDAIFYSYTRHINGFAAMLEDEVAAQLAKNNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAMGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPEAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLDFTRLGEEQSFKVFMKVKEQNVGRKNYVYGDLIWSDGKHHVRSPIVVKKTTTTLVRVLFVLFKVVWLTFNQRLLE | 778 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3021280 | 3031935 | + | ClCG02G003090.1 | Cla02g00312 | 266438 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00312 | 778 | Gene3D | Peptidase S8/S53 domain | 132 | 622 | IPR036852 | GO:0004252|GO:0006508 | |
Cla02g00312 | 778 | Pfam | Fibronectin type-III domain | 654 | 750 | IPR041469 | - | |
Cla02g00312 | 778 | Gene3D | - | 626 | 753 | - | - | |
Cla02g00312 | 778 | PANTHER | PEPTIDASE S8 | 114 | 752 | - | - | |
Cla02g00312 | 778 | Pfam | Subtilase family | 130 | 579 | IPR000209 | GO:0006508|GO:0008236 | |
Cla02g00312 | 778 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 26 | 122 | IPR037045 | - | |
Cla02g00312 | 778 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 107 | 609 | - | - | |
Cla02g00312 | 778 | Pfam | Peptidase inhibitor I9 | 45 | 113 | IPR010259 | - | |
Cla02g00312 | 778 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 114 | 752 | - | - | |
Cla02g00312 | 778 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cla02g00312 | 778 | PANTHER | PEPTIDASE S8 | 40 | 113 | - | - | |
Cla02g00312 | 778 | Pfam | PA domain | 385 | 455 | IPR003137 | - | |
Cla02g00312 | 778 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cla02g00312 | 778 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 540 | 550 | IPR023828 | - | |
Cla02g00312 | 778 | SUPERFAMILY | PA domain | 393 | 476 | IPR046450 | - | |
Cla02g00312 | 778 | CDD | Peptidases_S8_3 | 122 | 576 | IPR034197 | - | |
Cla02g00312 | 778 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 40 | 113 | - | - | |
Cla02g00312 | 778 | MobiDBLite | consensus disorder prediction | 25 | 41 | - | - | |
Cla02g00312 | 778 | CDD | PA_subtilisin_like | 341 | 471 | - | - | |
Cla02g00312 | 778 | Gene3D | - | 334 | 478 | - | - | |
Cla02g00312 | 778 | PRINTS | Subtilisin serine protease family (S8) signature | 200 | 213 | IPR015500 | - | |
Cla02g00312 | 778 | PRINTS | Subtilisin serine protease family (S8) signature | 130 | 149 | IPR015500 | - | |
Cla02g00312 | 778 | PRINTS | Subtilisin serine protease family (S8) signature | 539 | 555 | IPR015500 | - | |
Cla02g00312 | 778 | SUPERFAMILY | Subtilisin-like | 120 | 613 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01128 | Cla-Chr1:18746496 | Cla02g00312 | Cla-Chr2:3021280 | 1.00E-36 | dispersed | |
Cla01g01132 | Cla-Chr1:18808408 | Cla02g00312 | Cla-Chr2:3021280 | 0 | dispersed | |
Cla02g00312 | Cla-Chr2:3021280 | Cla10g00388 | Cla-Chr10:5273841 | 0 | dispersed | |
Cla10g00384 | Cla-Chr10:5156734 | Cla02g00312 | Cla-Chr2:3021280 | 2.44E-72 | dispersed | |
Cla10g00387 | Cla-Chr10:5265365 | Cla02g00312 | Cla-Chr2:3021280 | 1.42E-110 | dispersed | |
Cla10g00383 | Cla-Chr10:5153729 | Cla02g00312 | Cla-Chr2:3021280 | 5.29E-08 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00312 | - | - | csv:101212884 | 1281.54 |