Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00312 ATGCGTACACTTGATGTACGGAAGCAGAACACGCGAATGTTCTTGAAAAAGAAAGAAGAAAACCATGAAACAAATTCTTCTTCATCATCTTCTTCTTCTTCTTCTCCTTCCCTTCATACTTCTCACTCCCACTCCTATGTTGTCTACATGGGAGCTCATTCCCATGGCGGTCGAAAACCGGCCAATATCATCACCGATTCTCACCACGAATTCCTCCGACCGTTTCTCGAAAGTGAAGAGGAGTTTACCGGAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCCGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCTAAGGGAAAGATTCTCGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTATTGGCTGGTGCCATGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACACGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTTCCTGAGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAATGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCTTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCCGGAACGTACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGGACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGAAGAACTATGTATACGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGAAGACCACGACGACTCTAGTTCGAGTCCTCTTTGTGCTCTTTAAGGTTGTTTGGCTCACGTTCAATCAAAGACTTCTGGAATAA 2337 46.04 MRTLDVRKQNTRMFLKKKEENHETNSSSSSSSSSSPSLHTSHSHSYVVYMGAHSHGGRKPANIITDSHHEFLRPFLESEEEFTGDAIFYSYTRHINGFAAMLEDEVAAQLAKNNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAMGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPEAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLDFTRLGEEQSFKVFMKVKEQNVGRKNYVYGDLIWSDGKHHVRSPIVVKKTTTTLVRVLFVLFKVVWLTFNQRLLE 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3021280 3031935 + ClCG02G003090.1 Cla02g00312 266438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00312 778 Gene3D Peptidase S8/S53 domain 132 622 IPR036852 GO:0004252|GO:0006508
Cla02g00312 778 Pfam Fibronectin type-III domain 654 750 IPR041469 -
Cla02g00312 778 Gene3D - 626 753 - -
Cla02g00312 778 PANTHER PEPTIDASE S8 114 752 - -
Cla02g00312 778 Pfam Subtilase family 130 579 IPR000209 GO:0006508|GO:0008236
Cla02g00312 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 122 IPR037045 -
Cla02g00312 778 ProSiteProfiles Serine proteases, subtilase domain profile. 107 609 - -
Cla02g00312 778 Pfam Peptidase inhibitor I9 45 113 IPR010259 -
Cla02g00312 778 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 114 752 - -
Cla02g00312 778 MobiDBLite consensus disorder prediction 1 24 - -
Cla02g00312 778 PANTHER PEPTIDASE S8 40 113 - -
Cla02g00312 778 Pfam PA domain 385 455 IPR003137 -
Cla02g00312 778 MobiDBLite consensus disorder prediction 1 41 - -
Cla02g00312 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Cla02g00312 778 SUPERFAMILY PA domain 393 476 IPR046450 -
Cla02g00312 778 CDD Peptidases_S8_3 122 576 IPR034197 -
Cla02g00312 778 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 40 113 - -
Cla02g00312 778 MobiDBLite consensus disorder prediction 25 41 - -
Cla02g00312 778 CDD PA_subtilisin_like 341 471 - -
Cla02g00312 778 Gene3D - 334 478 - -
Cla02g00312 778 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Cla02g00312 778 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cla02g00312 778 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Cla02g00312 778 SUPERFAMILY Subtilisin-like 120 613 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01128 Cla-Chr1:18746496 Cla02g00312 Cla-Chr2:3021280 1.00E-36 dispersed
Cla01g01132 Cla-Chr1:18808408 Cla02g00312 Cla-Chr2:3021280 0 dispersed
Cla02g00312 Cla-Chr2:3021280 Cla10g00388 Cla-Chr10:5273841 0 dispersed
Cla10g00384 Cla-Chr10:5156734 Cla02g00312 Cla-Chr2:3021280 2.44E-72 dispersed
Cla10g00387 Cla-Chr10:5265365 Cla02g00312 Cla-Chr2:3021280 1.42E-110 dispersed
Cla10g00383 Cla-Chr10:5153729 Cla02g00312 Cla-Chr2:3021280 5.29E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00312 - - csv:101212884 1281.54