Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00420 | ATGTCGAAAGAAGTGACGGAAGAGGGACAGTCCGGTCTGAGAAAGGACTACGTCGACCCCCCGCCGGCGCCGCTCATCGACGCCGCCGAACTCACTCTCTGGTCCTTCTACAGAGCCCTAATCGCTGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACAATCGCCACCGTCATCGGCAACAACAAACAAACCAAAATGTGCGACGGCGTCGGAATCCTCGGAATCGCCTGGGCCTTCGGCGGCATGATTTTCGTCCTCGTCTACTGCACCGCTGGAATCTCCGGTGGTCATATTAATCCGGCGGTGACATTCGGGCTGTTTCTCGCGAGGAAAGTGTCACTGATTAGAGCGGTGGGGTACATGGTGGCGCAGTGCGCCGGAGCCGTCGTCGGCGTTGGGTTGGTTAAGGCTTTTATGAAGCATGATTATAACAACAACGGCGGCGGAGCCAACGCCGTTAATTCTGGTTACAGTAGGGGAACAGCTCTTGGTGCTGAGATTATTGGAACTTTTGTTCTTGTTTACACTGTCTTCTCTGCTACTGATCCCAAGAGAAGCGCGCGTGATTCTCACATCCCTGTTTTGGCTCCATTGCCGATTGGCTTCGCCGTGTTCATGGTTCATTTGGCAACCATTCCCATCACCGGAACCGGAATCAACCCGGCCAGAAGCTTCGGCGCCGCCGTCATCTACAACCATGAAAAACCCTGGAACGACCACTGGATCTTTTGGGTCGGTCCGTTCGTCGGAGCTTTAGCGGCAGCGGCGTACCACCAGTACATTCTCCGGGCAGCCGCCATTAAAGCTTTGGGATCATTCCGCAGCAACCCCACAAACTGA | 843 | 55.04 | MSKEVTEEGQSGLRKDYVDPPPAPLIDAAELTLWSFYRALIAEFIATLLFLYVTIATVIGNNKQTKMCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVGYMVAQCAGAVVGVGLVKAFMKHDYNNNGGGANAVNSGYSRGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNHEKPWNDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4119110 | 4121077 | - | ClCG02G004030.1 | Cla02g00420 | 266546 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00420 | 280 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 280 | IPR034294 | - | |
Cla02g00420 | 280 | Gene3D | Glycerol uptake facilitator protein. | 23 | 280 | IPR023271 | - | |
Cla02g00420 | 280 | CDD | MIP | 38 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | ProSitePatterns | MIP family signature. | 98 | 106 | IPR022357 | - | |
Cla02g00420 | 280 | SUPERFAMILY | Aquaporin-like | 30 | 264 | IPR023271 | - | |
Cla02g00420 | 280 | TIGRFAM | MIP: MIP family channel proteins | 42 | 258 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | Pfam | Major intrinsic protein | 31 | 258 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 80 | 104 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 117 | 136 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 166 | 184 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 202 | 224 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PRINTS | Major intrinsic protein family signature | 242 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g00420 | 280 | PANTHER | AQUAPORIN PIP-TYPE-RELATED | 1 | 280 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla02g00420 | Cla02g01174 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00420 | Cla-Chr2:4119110 | Cla05g02143 | Cla-Chr5:33021643 | 1.31E-158 | dispersed | |
Cla07g00932 | Cla-Chr7:25408662 | Cla02g00420 | Cla-Chr2:4119110 | 1.91E-118 | transposed | |
Cla02g00420 | Cla-Chr2:4119110 | Cla02g01174 | Cla-Chr2:25220123 | 3.40E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00420 | K09872 | - | csv:101209627 | 540.036 |