Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00428 ATGGACGACGGGGAGCTTGATTTTTCGAATCAGGAAGTGTTTTCCAGCCCTAATATGGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGACACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCATACCCACACATGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTTGTTACTGATGACACTGCAGAATCAACTGAGAAGAAGTCGAAGAAACGCCCGTTGGGTAACCGTGAAGCTGTTCGTAAGTACCGCGAGAAAAAGAAAGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCATTGAATCAGCATTTGATGAAGAGATTGCAGGGGCAGGCAGCACTCGAGGCTGAGATTGCTAGGCTCAAGTGTTTGCTTGTGGATATTAGGGGCAGAATCGAAGGGGAGATTGGTTCTTTCCCTTACCAAAAAGCTGTTAATCCTAACTTGTCCAACCCAAGCATCCCTGGTGCTTTTGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCCGGGGTCGATGGCAACAGAAGCAGTGAAGGTGCTGTGATAAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCCTCAATGTTTGGCAAATCATGATTCGGGATCAAAAGAACTACCTGGGTGTGGAGTAGGGAATGCAGTTTCAAATGATATTTCTTCAGGCAAGAAGAAAGGAGGAAGTCGTAAAGAGACATGGGCCTGA 807 45.11 MDDGELDFSNQEVFSSPNMEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSIPGAFVMNPCNMQCEDQVYCLHPGVDGNRSSEGAVINGQSFGACEFENPQCLANHDSGSKELPGCGVGNAVSNDISSGKKKGGSRKETWA 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4199100 4201157 - ClCG02G004110.2 Cla02g00428 266554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00428 268 Coils Coil 98 132 - -
Cla02g00428 268 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Cla02g00428 268 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Cla02g00428 268 MobiDBLite consensus disorder prediction 72 98 - -
Cla02g00428 268 Gene3D - 75 153 - -
Cla02g00428 268 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Cla02g00428 268 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Cla02g00428 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Cla02g00428 268 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Cla02g00428 268 MobiDBLite consensus disorder prediction 249 268 - -
Cla02g00428 268 CDD bZIP 91 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g00428 Cla02g01088 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00428 Cla-Chr2:4199100 Cla02g01168 Cla-Chr2:25125949 3.13E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60593 PF07716 bZIP_2 8.60E-14 CL0018 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00428 K25785 - csv:101208161 504.982