Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00435 ATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAGGCCTTTGGCCTCCTCGCCGGCCTCGCCTCCGACCGCTTCTCCACCTCCCTCCTGCTCCTCATCGGCTCCATCGAAGGCCTTATTGGCTACGGCGCTCAATGGCTCGTCGTCAGTCAAAAAATCAAACCACTCCCTTACTGGCAGATGTGTATATTTTTGTGTATGGGAGGGAATAGTACCACTTGGATGAACACCGGCGTGCTTGTTACTTGCCTGAGAAACTTCCGGCGAAACAGAGGCACTGTTTCCGGCATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTCACCGATCTTTGTACCGCTCTTTTCTCCGATAATCCCTCTTCTTTTCTCGCCCTCCTTTCCCTCACCCCCTTCGCCGTTTGTCTCACTGCTGTTCTCTTCCTCCGTGAAATCCCCTGTTCCGCCGATAACGAAACAGAGGACTCGAGATACTTCTGGGTACTCAACGCCGTTTCCGTCGCTGTCGCTGTCATTCTCTTAGCCTTCGATTCGATCCCAAATCCCACCTCGTCCGTATCGAGAATTTTCTCCATGGTGTTGCTGATTTTGCTAGCCTCACCTCTGGTAATCCCACTCCACTCGTTTGTCAAAAACAGGGGTCGGTCCGGTGAAGTTGCAGAGGCGTTGCTGGCGGACGAGAGTGCGGTGGAGGGTGCGGAAGAGGGGAAGCCGGTGATCGGAGAAGATCATACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTCTGTTTGGGTCGTTTCTGTGTGGAGTGGGAACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGATACGACGAGGTTTCGATTTTCATATCTCTGATGAGTATTTGGGGGTTTTTTGGCCGGATTTTATCGGGATCAGTGTCGGAGCATTTCATCAAGAAAGCAGGAATGCCAAGGCCACTATGGAACGCAGCTTCTCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATGCCTGGATCCTTATACATCGGCTCGGTTGTTGTCGGGATTTGCTATGGCGTCCGTCTTGCCATCACCGTCCCAATGGCCTCTGAAGTCTTCGGTCTCAAAAACTATGGCATGATCTACAATGTTCTAATCCTCAACCTCCCACTCGGTTCGTTCCTCTTCTCAGGACTGCTTGCCGGGATCCTCTATGATTGGGAGGCGACAACGACGAAGGAAGGCGGCAATATGTGTGTGGGAGGGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGTGGTTGGGTTTGCCATGGACTTGTTTTTGGCCTTTAGAACCAAGAGGTTGTATTCCAAAATGAGGGGTCTAAAGGGATAA 1413 50.67 MNLSQLQLNNLSVAKDLGKAFGLLAGLASDRFSTSLLLLIGSIEGLIGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRRNRGTVSGILKGYIALSTAIFTDLCTALFSDNPSSFLALLSLTPFAVCLTAVLFLREIPCSADNETEDSRYFWVLNAVSVAVAVILLAFDSIPNPTSSVSRIFSMVLLILLASPLVIPLHSFVKNRGRSGEVAEALLADESAVEGAEEGKPVIGEDHTIVEAMKTVEFWILFGSFLCGVGTGLAVMNNMGQIGLALGYDEVSIFISLMSIWGFFGRILSGSVSEHFIKKAGMPRPLWNAASQILMALGYILLAIAMPGSLYIGSVVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDWEATTTKEGGNMCVGGHCYRLVFVVMACSCVVGFAMDLFLAFRTKRLYSKMRGLKG 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4286729 4293296 + ClCG02G004200.1 Cla02g00435 266561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00435 470 Gene3D MFS general substrate transporter like domains 257 461 IPR036259 -
Cla02g00435 470 SUPERFAMILY MFS general substrate transporter 20 460 IPR036259 -
Cla02g00435 470 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 228 - -
Cla02g00435 470 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 231 469 - -
Cla02g00435 470 CDD MFS_Mch1p_like 1 447 - -
Cla02g00435 470 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 1 228 - -
Cla02g00435 470 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 231 469 - -
Cla02g00435 470 Pfam Nodulin-like 1 214 IPR010658 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g00435 Cla02g01155 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00435 Cla-Chr2:4286729 Cla07g01172 Cla-Chr7:28730378 2.81E-92 dispersed
Cla07g01067 Cla-Chr7:27273020 Cla02g00435 Cla-Chr2:4286729 2.40E-63 dispersed
Cla02g00435 Cla-Chr2:4286729 Cla02g01155 Cla-Chr2:24894424 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00435 - - cmo:103490296 800.045