Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00462 ATGTGGCTACAAAAAGGAAACAGTGTTAATAGCGTCAAAAAGGTAGCAGCAGCAGGCGGAGGGGGAAATGGGTTGGTTGCTATTGGTATAGACAGGGAAAAAGGAAGCCAAAATGCTCTCAGATGGGCCGCCGACCATTTGCTCGGAAAGGGTCAAACTGTGATTTTAATCCATGTTGTTCAGAGACCTTCCAGTGCGGCTGCTTGTTTGATTGGGGAAGCCATTGTTTGTAGTGGCGATGGTAATTTCACAGCTGATACCCCTCGTAAGCAGCAGCTCGAGATGCAGACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGTCTTGATGTTATATTGGAAGACACCGATATAGTTAAAGCATTAATCGAATACGTATCGTACGCTGCAATCGATAACTTGGTGCTCGGGGCTCCTTCGAAACATGGATTTATTAGGTTTAAGACGTCGAGCATGGGCAGTAGTGTGTCAAAAGGAGCACCGGATTTCTGCAATGTATATGTCATCTCGAAGGGGAAGGTGTCATCAGTGAGAAATGCATCTCGCTCAACTCCCTTTACTTCCCCTCTACAAGACCATTTACGGAAGATTTCTAAGCCGATTGCAAAGGGAGCAATTACTCCTCGACATAAGTTTAATTTAAGAGACAGGACATCATTCAAGCCTCGCAGCTTTCAAGATGAATCAATCAAGTCACCTTTCTCTCATGGAGGAGAGAGAACTTCTATCTCAAAATGTAGTGGAGGATTCTCTGAGTCAGAATCTGACATATCCTTTGTCAGCTCTGGCAGACCAAGCACGGATCGTACTTCTTCTGTTGCATTTGACTACTCTGATTCGGCTCCCCCACGATTTTCAACCAGCTCAGAGCATAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCTCAGTAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCGACGGAACTAAATAATTGGAGACGTGAAGAAGAACAAAAACTAGAAGAGGCACGACTTGCACAAGAGGCAGCAATGGCTATTGCAGAGCAGGAGCGAGTGAGATGCAGAGCGGCAATGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTCGAATCACATAAAAGAGAAAATCTAGAGATTAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATCTTGCACAGAACAACATCAGATACAGGAGATATTCAATTGAGGAGGTTGAATCGGCGACGGAACATTTTGCACAATCTCGGAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCAGTTGCAGTCAAGGTTTTGCGTCCTGATGCATCTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCTGAATATGGCATTCTAGTGTATGAATACATGTCCAACGGAAGTTTGGAGGATCGACTCTTTCGAAAGGGGAACACTCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCCGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAACTATGTTTGCAAGATAAGTGATGTTGGTTTGGCTAGACTTGTACCTGCTGTGGCCGAAAATGTAACACAATGCTACATGACTTCGGCTGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCTCCCATGGGGTTGGCTCACCATGTTGCTCGCTCTATCGAGAAGGGGACTTTTCGGGAGCTTCTGGACCCAGCTGTGGTTGATTGGCCAGTGGAACAAGCACTTTGCTTTGCAAAATTAGCACTTCAATGTGCAGAACTTAGGCGAAAAGACAGACCAGATCTCGGCAAGGTGGTGTTGCCAGAACTTAACAAATTGAGAGAATTTGGTGAAGACAAAATGGAGTTCATGGTGTCAAGGGATAGTAGTGGATCTTTGAGCGGTTTTAGCCATGCCTCAATGGAGCAGGACATAATGAGCGACCCACAACTAATGATGGCTTCAGAAAGTTCCAAGAGCCAATCTAGTGAATCATCACAGGTAGGAGGAGAATGA 2385 44.57 MWLQKGNSVNSVKKVAAAGGGGNGLVAIGIDREKGSQNALRWAADHLLGKGQTVILIHVVQRPSSAAACLIGEAIVCSGDGNFTADTPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDIVKALIEYVSYAAIDNLVLGAPSKHGFIRFKTSSMGSSVSKGAPDFCNVYVISKGKVSSVRNASRSTPFTSPLQDHLRKISKPIAKGAITPRHKFNLRDRTSFKPRSFQDESIKSPFSHGGERTSISKCSGGFSESESDISFVSSGRPSTDRTSSVAFDYSDSAPPRFSTSSEHSFASLPFKPKWTDLSNLNDFSSVSDESCRTSCSWSSQNLDEAELEMRRLKLELKQTMEMYSTACKEALTAKQKATELNNWRREEEQKLEEARLAQEAAMAIAEQERVRCRAAMEAADAAKRIAEFESHKRENLEIKALKEAEEMQRALKNLAQNNIRYRRYSIEEVESATEHFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDASQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVCKISDVGLARLVPAVAENVTQCYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHHVARSIEKGTFRELLDPAVVDWPVEQALCFAKLALQCAELRRKDRPDLGKVVLPELNKLREFGEDKMEFMVSRDSSGSLSGFSHASMEQDIMSDPQLMMASESSKSQSSESSQVGGE 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4479828 4484992 + ClCG02G004410.2 Cla02g00462 266588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00462 794 MobiDBLite consensus disorder prediction 234 258 - -
Cla02g00462 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Cla02g00462 794 MobiDBLite consensus disorder prediction 751 794 - -
Cla02g00462 794 ProSiteProfiles Protein kinase domain profile. 471 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00462 794 Gene3D HUPs 25 176 IPR014729 -
Cla02g00462 794 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 176 - -
Cla02g00462 794 Coils Coil 368 403 - -
Cla02g00462 794 Gene3D Transferase(Phosphotransferase) domain 1 544 753 - -
Cla02g00462 794 CDD STK_N 25 179 - -
Cla02g00462 794 Coils Coil 428 459 - -
Cla02g00462 794 PANTHER OS02G0152300 PROTEIN 22 777 - -
Cla02g00462 794 Pfam Universal stress protein family 28 168 IPR006016 -
Cla02g00462 794 Coils Coil 337 357 - -
Cla02g00462 794 Gene3D Phosphorylase Kinase; domain 1 435 543 - -
Cla02g00462 794 Pfam Protein kinase domain 472 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00462 794 PANTHER BNAA05G18880D PROTEIN 22 777 - -
Cla02g00462 794 SUPERFAMILY Protein kinase-like (PK-like) 453 729 IPR011009 -
Cla02g00462 794 SMART serkin_6 471 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00462 Cla-Chr2:4479828 Cla08g01256 Cla-Chr8:25473806 0 dispersed
Cla02g00462 Cla-Chr2:4479828 Cla09g00073 Cla-Chr9:688045 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80331 PF00069 Pkinase 2.70E-41 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00462 - - csv:101202855 1326.23