Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00489 ATGGAGTTTCTAAACCCTTTTTCTGGGTTCTTCTTCTTCTTCTTTTCTCTTCTTCTCTTCGTCGCTTTTTTGCGAAATTTACATCCTAAATTTCGCTACCCGCCTGGCCCCGGCGGATTGCCCATCATCGGCAACATGCTGATGATGGACCAACTCACCCACCGTGGCCTCGCCCGTCTCGCCGCCATCTACGGTGGCCTCTTCCACCTCCGACTCGGCGTCCTCCACATGGTGGTTGTCTCCACGCCAGATATGGCACGAGAATTCCTCCAAGTTCAAGACGTAGCCTTCGCAAATAGGCCTGCAAACGTTGCGATCACATATCTCACCTACGATCGCGCCGATATGGCCTTTGCCAACTACGGCCCATTTTGGCGCCAAATGCGAAAGATTTGCGTCGTCAAGCTCTTCAGCCGCCGACGCGCAGAGTCATGGGCGTCGGTGCGTGACGAAGTCGACGCCCTAGTCGGAATGGTTTCAAGTAAAATGGGGCAACCGGTGAATATCGGTGACCTAGTTTTCAGCCTGACACGAAACATAACCTACAAGGCCGCGTTTGGATCGAGGTCGCACCATGGACAAGATGAGTTCGTTAACATCTTGCAAGAATTCTCTAAACTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGATTTCAATGAAAGAATGGCAAAAGCTAGAAGAGATCTTGATGTGTTCATAAATACCATAATTGATGAACATTTACAAAAGAAAATGAAGAAAAAGGGAAAAAATGAAGATGATGAAGAAGAAGATTCAGATATGGTTGATGAATTAATGGCATTCCTTGCTGATGAGTCAAGTAACAATGAGTTTGATGATTCACAATCAATTCTTAAGCTCACTACAGACAACATCAAAGCCATAATCATGGTAAATTTTCCACCTTATATATCTATATTGACAGTCCATGAATCGGACCTCCAAAATCTCCCCTACTTAAAATTTGCCATCAAAGAAACCCTCCGCCTTCATCCGCCAATTCCACTGCTCCTCCACGAGACTGCTGTTGACACCTCCGTCGCCGGCTACTTCATTCCAACCGGTTCAAGAGTCTGGATCAACGCTTGGGCAATCGGTCGAGACCGAACCGCTTGGGAAGAATCGGACCGTTTCTGGCCAGGGAGGTTTCAAAACGATGTTGCTCCAGATTTCAATGGGAGCAATTTCGAGTTCATCCCGTTCGGGTCGGGTCGGCGATCTTGTCCAGGAATGCAACTTGGACTTTATGCTTGTGAGATGGCGGTTGCAAATCTTGTTCATTGCTTTTCGTGGAAATTGCCGGACGGAATGAATGCCAATGAGCTCGATATGAATGACTCGTTCGGACTCACTGCTCCAAGAGCGATTCGACTCGTAGCCGTACCGGGTTTTCGACTTAACTCGCCTGAGTATGAACTCGAAGGGAAGAGACGGGAAGATGTATGA 1476 47.36 MEFLNPFSGFFFFFFSLLLFVAFLRNLHPKFRYPPGPGGLPIIGNMLMMDQLTHRGLARLAAIYGGLFHLRLGVLHMVVVSTPDMAREFLQVQDVAFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVVKLFSRRRAESWASVRDEVDALVGMVSSKMGQPVNIGDLVFSLTRNITYKAAFGSRSHHGQDEFVNILQEFSKLFGAFNIADFLPWLGWIHARDFNERMAKARRDLDVFINTIIDEHLQKKMKKKGKNEDDEEEDSDMVDELMAFLADESSNNEFDDSQSILKLTTDNIKAIIMVNFPPYISILTVHESDLQNLPYLKFAIKETLRLHPPIPLLLHETAVDTSVAGYFIPTGSRVWINAWAIGRDRTAWEESDRFWPGRFQNDVAPDFNGSNFEFIPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWKLPDGMNANELDMNDSFGLTAPRAIRLVAVPGFRLNSPEYELEGKRREDV 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4807358 4810362 - ClCG02G004630.1 Cla02g00489 266615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00489 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Cla02g00489 491 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 8 307 - -
Cla02g00489 491 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 318 480 - -
Cla02g00489 491 PANTHER CYTOCHROME P450 84A1-RELATED 8 307 - -
Cla02g00489 491 PANTHER CYTOCHROME P450 84A1-RELATED 318 480 - -
Cla02g00489 491 SUPERFAMILY Cytochrome P450 34 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 Pfam Cytochrome P450 34 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 Pfam Cytochrome P450 319 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 Gene3D Cytochrome P450 28 310 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00489 491 Gene3D Cytochrome P450 314 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00489 Cla-Chr2:4807358 Cla07g00844 Cla-Chr7:23484197 0 dispersed
Cla02g00489 Cla-Chr2:4807358 Cla01g01960 Cla-Chr1:34243021 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00489 K09755 - csv:101217850 778.474