Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00497 ATGGGCGATACCCGTGGTGGTTGCTGTCCATCCATGGATCTCTTCCGCTCCGAGCCGATGCAGCTGGTCCAGCTCATCATTCCAATCGAGTCTGCGCATCGCACCATCTCCTACCTCGGTGATCTCGGCCTTCTTCAGTTCAAAGATCTCAATGCCGATAAAAGCCCATTCCAGCGTACTTATGCTGCACAGATTAAAAGATGTGGAGAGATGGCACGCAAATTGAATTTTTTCAAGGAACAGATGTTGAAGGCTGGATTGTCAAGCAAAAGCTCTGTGTCACAAGTTGATATCAATATAGATGACCTTGAGATCAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCTAATAGTGAGAAGCTGCAGCGTTCCTACAACGAACTTGTGGAGTATAAGCTTGTTCTCCAGAAGGCTGGAGAGTTTTTCAGTGCAGCACAGAGCAGTGCCGTAGAGCAGCAAAGGGAGTTTGAATCACGGCGAATTGGTGGAGATTCAATAGAAGTTCCGTTGTTGTTGGAACAAGAATCGTTTGTGGATCAGTCAAAGCCGGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAGTCTATGGCATTTGAAAGGATACTTTTTCGTGCTACCAGGGGCAATGTGTTTCTGAAGCAGGCTGCAGTTGAGGACCCTGTTGCAGATCCTGTTTCTGGAGAGAAGGTTGAGAAAAACGTGTTTATTGTTTTCTACTCTGGAGAAAGAGCAAAGAATAAGATTCTAAAAATATGCGAGGCATTTGGTGCAAATCGATACCCTTTTACTGAGGACTTGGGGAAACAAGCCCAAATGATTGCCGAGGTTTCTGGGAAACTGTCTGAGCTGAAGACTACAATAGATTTAGGGCTGCTGCACCGGGGTAATCTGTTGCAGACTATTGGAGAACATTTTGAAAATTGGAATCTCCTGGCGAGGAAGGAAAAGTCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACAAAAAAATGTCTGGTTGCTGAGGGGTGGGGTCCTGTTTTTGCAACAAAACAGATTCAAGATGCACTCCAGCGAGCAGCAGCTGATTCCAACTCCCAAGTTGGACCAATTTTCCAGGTTTTATTAACTACCGAAGCACCACCTACTTATTTTCGGACAAACAAATTCTCCTCGGCTTTTCAAGAAATTGTGGATGCATATGGGGTGGCAAGGTATCAAGAGGCAAATCCTGGTGTATACACCATTGTCACGTTCCCATTTCTATTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTCTGTTCCTTGCAACCCTGTATTTTATACTACGGGAAAAGAAACTTTCTTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTGATGATGTCACTTTTTTCGATATACACAGGTCTGATCTATAATGAGTTCTTTTCTGTCCCATTTGGACTGTTTGGTCGCTCAGCCTATGAATGTCGTAGTTCTGATTGCAGTGATTCTACCACTATGGGGTTGATAAAGGTGGGTTCTACGTATCCATTTGGCTTGGATCCTGTATGGCACGGCACTCGAAGCGAGCTTCCATTTCTTAACTCTCTGAAAATGAAAATGTCGATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTCAGGAACAGCATTAATATTTGGTTCCAATTCCTGCCACAGATGATATTCCTAAACAGCCTTTTCGGCTATCTTTCCCTTCTCATCATCATAAAGTGGTGCACTGGTTCAAATGCTGATCTGTATCACGTAATGATATACATGTTTCTGGGCCCTACTGGTGATCTGGCTGAAAACCAACTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTGCTCTTACTTGCCCTTGTTGCTGTGCCATGGATGCTGCTTCCGAAGCCTTTTCTTTTGAAGAGACAACACGAACAGAGGTTCCAAGGCCAATCTTATGCGCCCCTTCCAAGTGCTGATGATTCCCTCGAGTTGGATTCACATCATGATTCACATGGTCATGAGGAGTTTGAGTTCAGTGAGGTTTTTGTTCATCAACTTATACATACGATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCGCACTCAGAGTTGTCAAGTGTGTTTTACGACAAGGTTCTTGTTCTATCTGCGGGGTTCAACAACATTATAATCTTGATAGTAGGCATTATCGTTTTCATTTTCGCTACCATTGGCGTGTTGCTGCTGATGGAGACTTTAAGTGCCTTCCTTCATGCACTGCGTCTTCATTGGGTCGAGTTCCAAAACAAGTTCTACGAGGGAGACGGGTACAAATTCCATCCTTTCTCATTTGCATTGCTAGATGAAGATGATGAATGA 2457 43.51 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIESAHRTISYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEMARKLNFFKEQMLKAGLSSKSSVSQVDINIDDLEIKLGELEAELVEINANSEKLQRSYNELVEYKLVLQKAGEFFSAAQSSAVEQQREFESRRIGGDSIEVPLLLEQESFVDQSKPVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQAAVEDPVADPVSGEKVEKNVFIVFYSGERAKNKILKICEAFGANRYPFTEDLGKQAQMIAEVSGKLSELKTTIDLGLLHRGNLLQTIGEHFENWNLLARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAAADSNSQVGPIFQVLLTTEAPPTYFRTNKFSSAFQEIVDAYGVARYQEANPGVYTIVTFPFLFAVMFGDWGHGICLFLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGRSAYECRSSDCSDSTTMGLIKVGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIIIKWCTGSNADLYHVMIYMFLGPTGDLAENQLFPGQKNVQIVLLLLALVAVPWMLLPKPFLLKRQHEQRFQGQSYAPLPSADDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNIIILIVGIIVFIFATIGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEDDE 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4907715 4918799 + ClCG02G004720.2 Cla02g00497 266623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00497 818 PANTHER VACUOLAR PROTON ATPASES 6 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cla02g00497 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 818 - -
Cla02g00497 818 Pfam V-type ATPase 116kDa subunit family 38 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cla02g00497 818 Coils Coil 93 127 - -
Cla02g00497 818 PIRSF ATP6V0A1 10 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02031 Cla-Chr2:35337462 Cla02g00497 Cla-Chr2:4907715 0 transposed
Cla02g00497 Cla-Chr2:4907715 Cla08g01448 Cla-Chr8:27365651 1.08E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00497 K02154 - csv:101211364 1528.07