Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00525 ATGGCGGTTTCCGGTAGCAATTCGACCCAGATTCACCCTTCCGACGAATCTCCCTCCAGTTCTTCCAAAACTTCGCTATCAAACTTGAAAATCTACGCTGCGATCGGTATAATAGCTGCATGTGTGATTGCCGCCTCTGCTCTGATCTTCCTCTGTATCCGTAGAAGTAGAGACTCGAGGAAGCACAAAATGCGGGTGAAACATAGTTCTGGATTGATTCCATTGGTTTCCAAGGAGATCGCTGAGATTAAAGAGCCCGATCGGACTGCAGATTGCGAGAAAGGGGAAGTCGTTAGGGTTGAGAATAAGAAGGAGATTGAGTTCGAGAATGGAGTAGGTAAGAAGAGTCAAGAGAGCGACGTGTCCGGCGGTGGTCGAAGCGACGTGTCGGTGGAGGATCCGAACTTAGGGTGGGGACGGTGGTACAGCTTGAAGGAACTGGAAATAGCGACTGATGGGTTTCTTGAAGAGAATGTGATCGGAGAAGGAGGCTACGGCATCGTGTACAGAGGAGTTTCACCGGACGGCTCCGTCGTCGCCGTGAAGAATCTTCTTAACAATAAGGGTCAAGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCTATTGGAAAAGTGAGGCACAAGAACTTGGTGGGTCTGATAGGTTATTGTGCAGATGGAGCACAGAGGATGCTTGTGTATGAATTTATTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTAGGGCCTGTTAGTCCTCTAACATGGGATATTAGGATGAAGATTGCTCTTGGAACGGCAAAGGGTTTGGCCTATTTGCATGAGGGTTTAGAGCCTAAAGTTGTTCACCGTGATATAAAGTCCAGCAACATTCTCTTAGATAGAAAATGGAATGCAAAAGTGTCAGATTTTGGACTTGCAAAGCTCTTACAACCCGAAGCCAGCTATGTAACTACTCGTGTAATGGGTACCTTTGGATATGTCTCCCCGGAGTATGCAAGCACAGGCATGCTTAATGAGGGGAGCGATGTATACAGTTTCGGTGTTCTACTTATGGAGATCATCACTGGCAGAAGCCCGATTGACTATTCCAGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCAAATCGACGTGGGGAAGAGGTCGTAGATCCGTTGATTGAGATTCCACCCTCTCCAAGAACTCTAAAGAGAGTGTTGCTTGTTTGTCTACGCTGCATTGATTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATTGTTCATATGCTAGAGGCAGATGATTTTCCTTATCGTTCAGAGCTTCGATCTGTTCGAGAGAAAGATAACCAGCCTGCTCGTTTAGACGTGCCGAGTAAACTTCCATTGAAGCATGCTGGAATAGATGACACGGAATCAAGAAAGAGATAA 1413 46.57 MAVSGSNSTQIHPSDESPSSSSKTSLSNLKIYAAIGIIAACVIAASALIFLCIRRSRDSRKHKMRVKHSSGLIPLVSKEIAEIKEPDRTADCEKGEVVRVENKKEIEFENGVGKKSQESDVSGGGRSDVSVEDPNLGWGRWYSLKELEIATDGFLEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCADGAQRMLVYEFIDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLQPEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEIPPSPRTLKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSELRSVREKDNQPARLDVPSKLPLKHAGIDDTESRKR 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5408472 5412485 + ClCG02G005040.1 Cla02g00525 266651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00525 470 CDD STKc_IRAK 160 426 - -
Cla02g00525 470 SUPERFAMILY Protein kinase-like (PK-like) 130 426 IPR011009 -
Cla02g00525 470 MobiDBLite consensus disorder prediction 438 470 - -
Cla02g00525 470 Pfam Protein kinase domain 156 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00525 470 Gene3D Phosphorylase Kinase; domain 1 129 229 - -
Cla02g00525 470 PANTHER OS01G0323000 PROTEIN 16 442 - -
Cla02g00525 470 Gene3D Transferase(Phosphotransferase) domain 1 230 439 - -
Cla02g00525 470 ProSiteProfiles Protein kinase domain profile. 154 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00525 470 SMART serkin_6 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00525 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Cla02g00525 470 PANTHER OS03G0227900 PROTEIN 16 442 - -
Cla02g00525 470 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Cla02g00525 470 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00525 Cla-Chr2:5408472 Cla05g00149 Cla-Chr5:1397457 2.65E-167 dispersed
Cla02g00525 Cla-Chr2:5408472 Cla08g01583 Cla-Chr8:28504183 6.50E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80333 PF00069 Pkinase 3.50E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00525 - - cpep:111792269 853.973