Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00558 ATGGCTTCTCCTTCTTCTTCCTCTGAACTTCCTCTCAAACCCATTCCTGGGGGCTATGGCTTCTCCTTCCTCGGTCCGATCAAAGACCGTTATGACTATTTCTACTTCCAAGGCAAAGATGAATTTTTCCGTTCCCGAATGACCAAATATCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCATCGTACTTCTCGACGCCATCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAAAAACGCAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGTCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAATTCGCCGATTTCAACCCGATTAGTGATTCCATGTCGTTTGATTACATTTTCCGTCTACTCTCCGATGGAACTCCTGATTCAAAATTAGCCGCCGATGGACCTGGAATGTTCGATTTATGGCTTTCCTTTCAGCTCGCCCCACTGGCTTCCATTGGGGTTCCGAAAATTTTCACAGTTTTTGAAGATCTCATCATTCATACCATTCCCCTGCCTTTCTTTCCAGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGAACATTTCTAGACGAAGCAGAAAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCCTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTAAAATGGGTAGGCACCGCCGGCGAGGATCTCCACCGGAAGATCGCTGACGAAGTCAGAGCCACCGTGAAGGAAGAAGGTGGATTGACTTTCGCCGCCTTGGAGAAAATGAGTCTCCTGAAATCCGTCGTGTACGAGGCTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTATGGGAAGGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCAAGAAAGGGGAGACGATTTTTGGTTATCAGCCATTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGGAGTTCGTCGGTGATAGGTTCGTCGGAGAAGAAGGGGAGAAGCTTCTGAAATATGTTTACTGGTCAAACGACCGGGAGACGGTGCAGCCAACGGCGGAGAACAAGCAGTGTCCCGGGAAGAATCTGGTGGTGCTGATGGGCAGGATTATTCTGGTGGAATTCTTCCTCCGGTATGATACATTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCGGTGAAGTTCAAGTCTCTAACCAAAGCCACCGAACAGACACCGATTCCCCTGCCTCTGAAACCCATCCCCGGCAGCTATGGCTTCCCCATTTTCGGACCCATCAAAGATCGCTACGATTACTTCTACATCCAAGGCAGAGAAAAATTCTTCCGAACGAGAATGGCTAAATATAACTCCACTGTGTTCCGAGCCAACATGCCGCCGGGCCCCTTCATCTCTTCCGATTCTAAAGTCATCGTCCTTCTCGACGCCCACAGTTTTCCGATCCTCTTCGACACCACTAAAGTCGAGAAACGCAACGTTCTCGATGGAACTTACATGCCCTCCGTCGCCTTCACCGGCGGAATTCGTGCCTGTGCCTTCTTAGATCCCTCCGAAACAGAGCACTCTGTTCTCAAACGCCACTTCCTCAAATTTCTCGCCTCTCGTCATGACAAGTTCATTCCTCTGTTTCGAAGCTCCGTGTCGGAGATGTTCGATAAGCTCGAAAAGGAATTGGAAAAGAATAACGTCGCTAGTTTCAACCCCGTCAGCGATTCGGCCTCGTTCGATTTCATATTTCGATTGCTTTCCGATCGGAGCCCCGATGAGAAATTGAGCTCCGAGGGACCGGGTTTGGTCGATAAATGGCTCAGTATGCAGCTCGCTCCGTTAGCCACTCTCGGTTTGCCCAAATTTCTCACCTGCTTCGAAGATCTCATCATGCATACCTTCCGTTTACCGTTTGCACTCGTCAAAAGCGCTTACAGCAAGCTTTACGACTCATTTTACGAGTCGTCGGGTTCATTTCTAGACGAAGCAGAGAAGCAGGGGATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCGATTATACTAAACTGGGTCGGATCTGCCGGCGAGGGGCTTCATCTGAAACTCGCCGGCGAAATCAGAGCCGCCGTGAAGGAAGACGGAGGAATAACATTCAGCGCCTTAGAGAAGATGAGTCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCTTACCAATACGCGAAGGCGAAACAGGATATTGTGATCGAGAGCCATGATTCTGCTTTCAAGATCAAGAAAGGGGAAATGATTTTTGGGTATCAGCCGATCGCGACGAAGGATCCGAAGGTGTTTGAGAATCCGGAGGAATTTGTGGGCGATAGGTTCATCGGAGAGAAAGGGGAGAAGCTTCTGAAGTATGTGTACTGGTCGAACGGCCGGGAGACGGAGGAGCCGACGACGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTAGTGTCCAGAGTAGTTCTGGTGGAACTTTTCCTCCGTTACGACACGTTCGCCGTCGAGGGAACTCGGTCATCGTTGGGTTGGTCCGTTAAG 2826 50.07 MASPSSSSELPLKPIPGGYGFSFLGPIKDRYDYFYFQGKDEFFRSRMTKYRSTVFRANMPPGPFISSDSRVIVLLDAISFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKFADFNPISDSMSFDYIFRLLSDGTPDSKLAADGPGMFDLWLSFQLAPLASIGVPKIFTVFEDLIIHTIPLPFFPVKSGYRKLYNAFYSSSGTFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKIADEVRATVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKIKKGETIFGYQPFATKDPKIFENSEEFVGDRFVGEEGEKLLKYVYWSNDRETVQPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATEQTPIPLPLKPIPGSYGFPIFGPIKDRYDYFYIQGREKFFRTRMAKYNSTVFRANMPPGPFISSDSKVIVLLDAHSFPILFDTTKVEKRNVLDGTYMPSVAFTGGIRACAFLDPSETEHSVLKRHFLKFLASRHDKFIPLFRSSVSEMFDKLEKELEKNNVASFNPVSDSASFDFIFRLLSDRSPDEKLSSEGPGLVDKWLSMQLAPLATLGLPKFLTCFEDLIMHTFRLPFALVKSAYSKLYDSFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGEGLHLKLAGEIRAAVKEDGGITFSALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFKIKKGEMIFGYQPIATKDPKVFENPEEFVGDRFIGEKGEKLLKYVYWSNGRETEEPTTENKQCPARDLVVLVSRVVLVELFLRYDTFAVEGTRSSLGWSVK 942
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5902632 5914930 - ClCG02G005440.1 Cla02g00558 266684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00558 942 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 Pfam Cytochrome P450 781 887 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 Pfam Cytochrome P450 305 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 PANTHER CYTOCHROME P450 26 484 928 - -
Cla02g00558 942 PANTHER CYTOCHROME P450 26 9 457 - -
Cla02g00558 942 PANTHER HYDROPEROXIDE LYASE 484 928 - -
Cla02g00558 942 SUPERFAMILY Cytochrome P450 11 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 Gene3D Cytochrome P450 481 942 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 Gene3D Cytochrome P450 10 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 SUPERFAMILY Cytochrome P450 484 933 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00558 942 PANTHER HYDROPEROXIDE LYASE 9 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00206 Cla-Chr2:2148850 Cla02g00558 Cla-Chr2:5902632 2.57E-118 dispersed
Cla02g00558 Cla-Chr2:5902632 Cla05g02601 Cla-Chr5:37242515 8.46E-09 dispersed
Cla02g00558 Cla-Chr2:5902632 Cla08g01524 Cla-Chr8:27999989 2.36E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00558 K01723 - csv:101211324 882.093