Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00599 ATGGAAGCTCTCTCTGTTACTCTTTACATAATAATATTCCTTTTTCTTTTTGCTTTCTTTTCCATTTCATTTCTTAAAAGAAATGGAAAGCCTAAATCCCAAAAAGCTCTTAGACTTCCTCCTGGTTCCATGGGATTGCCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGACCCTAATATCTTTTTCTCACAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAACATTTTGGGATATCCTTGTGTGATGTTGGCAAGCGCCGCCGCAGCACGGTTCGTTCTGGTGACAAACGCCCATTTATTCCGGCCGACTTACCCGAAAAGCAAAGAGACCATGATCGGACCGGCGGCGCTTTTCTTCCACCAAGGAAATTACCATTCTAACCTCAGGAAACTCGTTCAAAATTCTTTATCTCTTGAACGACTCAGAATTCTTGTTCCTCATATTGAAGCCGCCGCCATTTCCGCCACCGATTCCTGGGCCGCCGCCGGCCACGTCATCAACACCTTCCTCGAAATGAAAAAGTTTTCTTTTGAGGTGGGAATTGTAGCAGTGTTTGGTAAGCTAGAAAATGAGTACAAAGAGAAGCTAAAAGAAAAGTATTGCATATTAGACAAAGGCTACAACTGTTTTCCAACCAAATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTGAGAGAGATTCTGGGAGAGATAATTATGGAGAGAAGAGAAAAAAGAGTAACAGAAAAAGATTTAGTGGGTCATCTTTTAAACTTCAGAGATGAAAATGGAGAATGTTTAAGTGAAGATCAAATCGCCGACAACATCATCGGAGTTCTCTTCGCCGCCCAAGACACCACCGCCACTGTCCTCACTTGGATTCTTAAATATCTTCATGACAACTTGAAGCTCTTTGAAGCCGTCAAGGCAGAGCAGATGGAAATTTATAGAAAAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAAATTAAAGACATGCCCTTTACTCATAGGGTGGTATTAGAGAGCTTGAGAATGGCTAGCATCATATCTTTTACTTTTAGGGAGGCAGTTGTTGATGTGGAATATAAAGGGTATCTTATCCCAAAGGGTTGGAAGGTGATGCCCTTATTTAGGAATATTCATCACAACCATGAGTACTTCCCTGATCCTCATATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGACCCAATACATTCATGCCATTTGGCAATGGAGTACATTCTTGCCCTGGCAATGAACTTGCCAAGCTGGAAATCCTCATCTTGCTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGTGGGGTTGAATATGGGCCATTCCCAATGCCTGTCCACGGGCTACCGGCCAGATTTTTCAAACAAACAACAACCAACCAATAG 1434 41.98 MEALSVTLYIIIFLFLFAFFSISFLKRNGKPKSQKALRLPPGSMGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGYPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVQNSLSLERLRILVPHIEAAAISATDSWAAAGHVINTFLEMKKFSFEVGIVAVFGKLENEYKEKLKEKYCILDKGYNCFPTKLPGTAYSKALSARKKLREILGEIIMERREKRVTEKDLVGHLLNFRDENGECLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNLKLFEAVKAEQMEIYRKNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVEYGPFPMPVHGLPARFFKQTTTNQ 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6511683 6515882 - ClCG02G005930.1 Cla02g00599 266725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00599 477 Gene3D Cytochrome P450 28 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PANTHER CYTOCHROME P450 26 12 471 - -
Cla02g00599 477 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 471 - -
Cla02g00599 477 Pfam Cytochrome P450 40 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Cla02g00599 477 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00599 477 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00599 Cla-Chr2:6511683 Cla05g02039 Cla-Chr5:32102232 0 dispersed
Cla02g00599 Cla-Chr2:6511683 Cla08g01571 Cla-Chr8:28354854 2.18E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00599 K09843 - csv:101219389 871.692