Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00600 GAGAACCTCGCCGGAAAACCAAAAACAAAAGTAAAGCAAAACCAAAGAGAAAGTTCATACCTCTCCGGCAATGGCTTCCACGACAAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCACCAAGAAGTCGGCCACAAGAGCCTGTTGCAAAGCGATGCTCTGTATCAGCAATTCACTCTCAGTACATTCTGGAGACGAGCGTTTATCCAAGGGAGCCTGAATCAATGAAGGAATTAAGAGAATTGACAGCAAAACATCCATGGAATATAATGACGACATCGGCGGATGAAGGACAGTTCTTAAACATGTTATTGAAGCTAATTAATGCGAAGAAAACGATGGAGATTGGAGTTTATACTGGCTACTCGCTTCTGGCTACAGCCCTAGCTCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTGGGTTTGCCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAGAATCATGGAAGCTTTGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATTGATTTGGTCAAAGTTGGGGGAGTGATCGGGTACGACAACACTCTATGGAACGGGTCAGTGGTTGCCCCACCTGATGCACCCATGCGCAAGTATGTTAGGTATTATCGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCAATTGACCCTAGGATCGAGATTTGTATGCTTCCCGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTAA 834 45.44 ENLAGKPKTKVKQNQRESSYLSGNGFHDKRTRRPEPSRKAPRSRPQEPVAKRCSVSAIHSQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAIDPRIEICMLPVGDGITLCRRIN 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6555306 6557377 - ClCG02G005940.1 Cla02g00600 266726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00600 277 MobiDBLite consensus disorder prediction 1 51 - -
Cla02g00600 277 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 52 276 IPR002935 GO:0008171
Cla02g00600 277 CDD AdoMet_MTases 115 216 - -
Cla02g00600 277 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 275 IPR029063 -
Cla02g00600 277 PANTHER O-METHYLTRANSFERASE-RELATED 43 277 - -
Cla02g00600 277 Gene3D Vaccinia Virus protein VP39 56 277 IPR029063 -
Cla02g00600 277 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 43 277 - -
Cla02g00600 277 MobiDBLite consensus disorder prediction 26 46 - -
Cla02g00600 277 Pfam O-methyltransferase 65 276 IPR002935 GO:0008171
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00600 Cla-Chr2:6555306 Cla11g01344 Cla-Chr11:26893080 2.13E-40 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00600 K00588 - csv:101205648 434.876