Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00602 ATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCAGGAACGACCCATGATGATTCGATAGGTTTTAATGGGGTTTCTACAGCGAGCAAGAGGAAATGGACCCGTTTTTTGCCTCTGTTTGTGGCCATGGTGGTCATAGCAGAGATCGCTTCTCTTAGTCGGCTCGACATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCTCCGCTTTTGCAAGAAGGCAATGAAATGTCTATTGATGATGGAGGAATTGATAGAGTTAGCTGTGAGGAGTGGCTGGAGAAGGAAGATGCTGTGGAGTATTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGCCAGCAGCCTGATGCTATATTCGGATCACCTCATCAAGGTAGTGCTGCTAGTGTACTTCGATCCATGGAATCATCGCATTACTATCCAGAAAACAATATTGCTTTGGCAAGACGGAAGGGTTATACCGTGGTTATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCATGGGCAGAATACGAGATAATGGCACCAGTGCAACCAAAAACGGAGCCTGCCCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCCCGCAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAATTGAATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGGTGCGCTAAAACCTGAACAAGTATTAGTTTTGAAACTTTTACTTCGATTTATTGACCGACTTTGTTTGCTAAGCGTTGTCAGTAAGAGATACAGTGACAGGGAGGGTCTAACTGATTTGGAAATGGAAGAACTTAGTGATCTTTTGCTGATATTGGGAAGAATACACAACCCGGGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACGGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGCGCTCCAAACATTGAGGAGTTTGCTCCTTCTCCTGATTCATTTTTGCACATCAAGGAATTTTCGGATGTTGAGTCAATTGCCAAGTCCATGAAATACCTTGCTGAAAATCCCCAAATGTACAATCAATCGATAAGATGGAAGTATGACGGTCCATCTGAGTCTTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCATGCCGCCTTTGCATCCATATGGCAACCATCATCCACGAGAAAGAAGAAAACAGTCCCCGGTTCAAGAAACGGCCGTGCAAGTGTTCTCGAGGCTCTGATACCATGTATCATTTATACGTAAGGGAGAGAGGGAGGTTTGAAATGCAATCCATTTTCTTGAGGTCAGGAAATTTGACGTTGGAGGCTTTAGAATTGAGGGTACTCGAAAAGTTCAATTCTTTGAAACACGTACCAATTTGGAAGCAAGAACGGCCCGAAAGCATAAGAGGAGGAGATGAACTAAAACTATACAGAATATATCCTGTTGGGTTGACTCAGAGGCAGGCTTTATATACCTTCAGATTCAAAGACAATAATCATTTCAGAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAGTCATATTTGTCTGA 1656 43.36 MGIFSKQKIWRAGTTHDDSIGFNGVSTASKRKWTRFLPLFVAMVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPLLQEGNEMSIDDGGIDRVSCEEWLEKEDAVEYSRDFKRKPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAIFGSPHQGSAASVLRSMESSHYYPENNIALARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRGALKPEQVLVLKLLLRFIDRLCLLSVVSKRYSDREGLTDLEMEELSDLLLILGRIHNPGLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEEFAPSPDSFLHIKEFSDVESIAKSMKYLAENPQMYNQSIRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFKKRPCKCSRGSDTMYHLYVRERGRFEMQSIFLRSGNLTLEALELRVLEKFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFKDNNHFRTHIETHPCAKMEVIFV 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6592714 6598799 - ClCG02G005960.1 Cla02g00602 266728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00602 551 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 317 422 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cla02g00602 551 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 316 528 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cla02g00602 551 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 258 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cla02g00602 551 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 427 - -
Cla02g00602 551 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 316 528 - -
Cla02g00602 551 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 258 - -
Cla02g00602 551 Gene3D - 161 400 IPR038577 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00602 Cla-Chr2:6592714 Cla08g00876 Cla-Chr8:21204407 8.60E-12 dispersed
Cla02g00602 Cla-Chr2:6592714 Cla05g01076 Cla-Chr5:11135376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00602 K00753 - csv:101205170 927.161