Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00625 ATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCACTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGCCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTTCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGGTGAGTACCGAAGTTTCCTTGTTTAATACAATGACAAGGACAAGGAGACATTACCTGTTGTTTTTAAAACATTCTAAACGATATCTATTTTGTTTTCTGCAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGAACTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCGGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAGTGAGTAA 1944 42.34 MDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPLQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKVSTEVSLFNTMTRTRRHYLLFLKHSKRYLFCFLQRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGTNDRDDVFSDSESEGGSSKSKKEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYESE 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6960842 6967184 + ClCG02G006200.2 Cla02g00625 266751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00625 647 MobiDBLite consensus disorder prediction 494 628 - -
Cla02g00625 647 MobiDBLite consensus disorder prediction 1 74 - -
Cla02g00625 647 ProSiteProfiles C2 tensin-type domain profile. 331 492 IPR014020 -
Cla02g00625 647 SMART PTEN_C2_2 329 452 IPR014020 -
Cla02g00625 647 ProSiteProfiles Phosphatase tensin-type domain profile. 145 324 IPR029023 -
Cla02g00625 647 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 472 647 - -
Cla02g00625 647 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 14 443 - -
Cla02g00625 647 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 259 298 IPR000387 GO:0016311|GO:0016791
Cla02g00625 647 MobiDBLite consensus disorder prediction 548 588 - -
Cla02g00625 647 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 472 647 - -
Cla02g00625 647 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 14 443 - -
Cla02g00625 647 MobiDBLite consensus disorder prediction 494 524 - -
Cla02g00625 647 MobiDBLite consensus disorder prediction 525 547 - -
Cla02g00625 647 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 158 326 IPR029021 -
Cla02g00625 647 MobiDBLite consensus disorder prediction 92 112 - -
Cla02g00625 647 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311|GO:0016791
Cla02g00625 647 Gene3D Protein tyrosine phosphatase superfamily 130 327 IPR029021 -
Cla02g00625 647 CDD PTP_PTEN 155 320 IPR045101 GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00625 Cla-Chr2:6960842 Cla06g01570 Cla-Chr6:29256796 5.37E-07 dispersed
Cla10g01471 Cla-Chr10:29933089 Cla02g00625 Cla-Chr2:6960842 1.86E-47 transposed
Cla01g01668 Cla-Chr1:31569197 Cla02g00625 Cla-Chr2:6960842 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00625 K01110 - csv:101222304 1114.75