Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00635 ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATTACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAAGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCGGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGAGGAAGCTCTGGACCATCTCGCGGCCGACGACTACCTCGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA 1068 46.54 MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNYKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLAADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7140410 7143224 - ClCG02G006330.1 Cla02g00635 266761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00635 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Cla02g00635 355 CDD CAD1 11 349 - -
Cla02g00635 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Cla02g00635 355 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Cla02g00635 355 PANTHER ALDEHYDE REDUCTASE 5 354 - -
Cla02g00635 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cla02g00635 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cla02g00635 355 Gene3D - 13 350 - -
Cla02g00635 355 Gene3D - 164 320 - -
Cla02g00635 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cla02g00635 355 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00635 Cla-Chr2:7140410 Cla04g00325 Cla-Chr4:11325265 2.37E-19 dispersed
Cla01g00122 Cla-Chr1:1137091 Cla02g00635 Cla-Chr2:7140410 1.41E-87 transposed
Cla01g01784 Cla-Chr1:32783667 Cla02g00635 Cla-Chr2:7140410 1.23E-118 transposed
Cla05g01605 Cla-Chr5:27322767 Cla02g00635 Cla-Chr2:7140410 5.09E-112 transposed
Cla02g00635 Cla-Chr2:7140410 Cla05g01102 Cla-Chr5:11409366 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00635 K00083 - csv:101214622 631.713