Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00668 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTACTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGTGAAATGAGATACTCCGACTTAAAGAAGATCGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCCAATCGAGCAAAGAACACGGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACAATGAAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.53 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNNEEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7668762 7671185 - ClCG02G006660.1 Cla02g00668 266794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00668 379 CDD PP2Cc 42 337 IPR001932 -
Cla02g00668 379 SMART PP2C_4 25 335 IPR001932 -
Cla02g00668 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 373 - -
Cla02g00668 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cla02g00668 379 Gene3D - 25 349 IPR036457 -
Cla02g00668 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Cla02g00668 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 373 - -
Cla02g00668 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cla02g00668 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00668 Cla-Chr2:7668762 Cla02g01181 Cla-Chr2:25301031 2.62E-139 dispersed
Cla02g00668 Cla-Chr2:7668762 Cla01g02007 Cla-Chr1:34701310 1.08E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00668 - K01102 csv:101216862 711.835