Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00695 ATGCGGGGACAACATTCTCACCCACTGAAGTCGGGTCTAGCCGGACCCGATGAGGAAAACGAACCAGTTCGCTCGTATCTCCCTGGAATGAACGTCCCGTTAGGCGCCGGAATTCGGAAGAAGGGAACTGGAGTCCGACCATGGCTACTACTGGACTCCACCGGCGGAGCTCAGGTAGTTGAGGCCGGAAAACATGTGATTATGCGGCGGACCGGCCTGCCGGCGCGTGACCTTCGGATTCTCGATCCGTTGCTCTCGTACCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTAATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTAGAGGAGCTTCAGAGACGAGTATTGCGGCACCATCAAGCCACTAAGGCTTCTCAGGAGGGCGTTGGTGATGATTCTAATTGGAGAAATCTATATGACCTGGAGGAGCCTCGTTCAAGGACTCAAAGTCCTCCTAATTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAACATGAAACAAAGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAAAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGAAATGGAAGATGACGATCAGCAGTTGGGCAAAGATGACAGGCATGAGACTTGTCCTATTATTCCTGCTGAAATATCATTGGACGGTGGTGGAATTTCTGCTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGGACCCGGACAAGCACTACCCATAGCGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTTTTGGAGGCATACTTTGTGCAAATTGATGGTACACTAAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTCGTCGTCAGCGCTTTTGTCGTGGTGGCAGGTATCTTCGGGATGAACATCCATATTGAACTGTTTGAACCTGAAAAAGCAGGCATGCCGGAGTTCCTATGGACTGTTGGTGGTGGTGCTACAGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTCGAGTAG 1506 47.61 MRGQHSHPLKSGLAGPDEENEPVRSYLPGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHVIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKASQEGVGDDSNWRNLYDLEEPRSRTQSPPNSYQGFPQAEEEEGKENMKQSLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDEMEDDDQQLGKDDRHETCPIIPAEISLDGGGISANYEGNMDASQDHLFGASNVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8172424 8177482 - ClCG02G007110.1 Cla02g00695 266821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00695 501 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 22 501 - -
Cla02g00695 501 MobiDBLite consensus disorder prediction 1 25 - -
Cla02g00695 501 Pfam CorA-like Mg2+ transporter protein 384 492 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cla02g00695 501 Gene3D Magnesium transport protein CorA, transmembrane region 181 429 - -
Cla02g00695 501 Gene3D - 37 119 - -
Cla02g00695 501 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 22 501 IPR039204 -
Cla02g00695 501 Coils Coil 211 231 - -
Cla02g00695 501 MobiDBLite consensus disorder prediction 162 192 - -
Cla02g00695 501 CDD Mrs2_Mfm1p-like 48 499 IPR039204 -
Cla02g00695 501 MobiDBLite consensus disorder prediction 293 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00695 Cla-Chr2:8172424 Cla10g01225 Cla-Chr10:26930061 3.44E-58 dispersed
Cla02g00695 Cla-Chr2:8172424 Cla07g00057 Cla-Chr7:625087 8.46E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00695 - - csv:101213978 895.96