Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00741 ATGATTTCCATTGCCCAAAATCCCAATGTCTCCTCCGAACTCTCCTCCTCTCCCCCGCCTTCCACCGCCACAACCCATACTTTCCGATCCAAATTTCCCGATATTACTATCCCCGACCACCTCCCTCTTCACAGTTACTGCTTTCAGAACCTCTCTGAAGTTTCCCACCGCCCCTGTTTGATCCTCGGCTCCACTGGCAAATCCTATTCCTACTCCGACACCCACCTCTTCTCCCTCAAAGCCGCCGCCACTTTCTCTAAACTTGGAGTTAAGAAAGGCGATATCATTATGATTCTTCTCCACAACTCTCCCGAATTTGTTTTCTCTTTTATGGCTTCCTCCATGCTCGGCGCCGTCGCCACCACCGCAAATCCGTACTACACGGCGGCCGAGATTTCCAAGCAGTTGAAGGCCTCCGGTGCCAAATTCGTGGTTACTTACTCCCAATGCGTCGACAAGCTCAAAGAATCCGGCGAACATCTCACCATTGTCACCGTCGATGACCCGCCAGAGAATTGTCTGAGCTTCTCGATGGTGTACGACGCCGATGTGAATGACGTACCCTCCGTGGAGATTGACACAAACGACGCCGTTTCGCTACCGTTCTCCTCTGGCACGACCGGGCTCCCGAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTGGATGGAGAGAATCCAAACTTGTATTTAAGAAGAAACGACGTAGTGCTATGCGTGTTACCAATGTTCCACATATTCTCGTTGAGTAGCATAGTTTTGATATCAATTAGGTCAGGGGCAGCGCTGCTTTTGATGGAGAAGTTCGAGATAGAGTCATTGCTAAGACTAATAGAGAGGCACGAGGTGACAGTGGCGGCGGTGGTGCCGCCGCTTGTGGTAGCGCTAGTGAAGAACCCGAGGTTGGCGGATTTTGACCTGAGCTCGATTAGATTGGTCCTTTCCGGAGCGGCGCCGCTGCGGAAGGAGCTGGAGGAGGCTCTCATGGAGAGGCTTCCTCAAGCCATTTTTGGTCAGGGTTATGGGATGACGGAAGCGGGTCCCGTGCTGAGCATGTGCTCGGCTTTTGCAAAGGAGCCACTGATGCCAACAAAATCAGGTTCTTGTGGCAGAGTAGTGAGAAACTCGGAGCTCAAAGTCATTGACCCACAAACCGGCGACTCCCTCACTTATAATCAACCTGGAGAGATTTGTGTTCGAGGTCCTCAAGTAATGAAAGGATATTTGAACGACCCGGTGTCCACGTCCTTGACTGTCGACGTGGAGGGTTGGCTTCATACCGGTGACATTGGTTACATTGACGATGAAGATGAAATTTTTATTGTTGACAGAGTCAAAGAGATCATTAAATTTAAAGGTTTTCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTTGTAACCCATCCATCTATTGTGGATGCCGCTGTTGTCCCGCAAAGTGATGATGTTGCTGGTGAAGTTCCAGTGGCTTTCGTAGTTCCATCAACTCAGGATGAACTTACTGAGGACGCAGTAAAAGAATTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCAGAAAGTGTATTTTGTGCAAACAATTCCAAAATCACCCTCTGGAAAGATTTTGAGAAAGGAACTCAAAACCAAGCTCTCAGTGTCACCTGGATTTTAG 1674 49.34 MISIAQNPNVSSELSSSPPPSTATTHTFRSKFPDITIPDHLPLHSYCFQNLSEVSHRPCLILGSTGKSYSYSDTHLFSLKAAATFSKLGVKKGDIIMILLHNSPEFVFSFMASSMLGAVATTANPYYTAAEISKQLKASGAKFVVTYSQCVDKLKESGEHLTIVTVDDPPENCLSFSMVYDADVNDVPSVEIDTNDAVSLPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLRRNDVVLCVLPMFHIFSLSSIVLISIRSGAALLLMEKFEIESLLRLIERHEVTVAAVVPPLVVALVKNPRLADFDLSSIRLVLSGAAPLRKELEEALMERLPQAIFGQGYGMTEAGPVLSMCSAFAKEPLMPTKSGSCGRVVRNSELKVIDPQTGDSLTYNQPGEICVRGPQVMKGYLNDPVSTSLTVDVEGWLHTGDIGYIDDEDEIFIVDRVKEIIKFKGFQVAPAELEALLVTHPSIVDAAVVPQSDDVAGEVPVAFVVPSTQDELTEDAVKEFIAKQVVFYKRLQKVYFVQTIPKSPSGKILRKELKTKLSVSPGF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9012530 9019634 + ClCG02G007630.2 Cla02g00741 266867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00741 557 Gene3D - 452 553 IPR045851 -
Cla02g00741 557 MobiDBLite consensus disorder prediction 1 25 - -
Cla02g00741 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 550 - -
Cla02g00741 557 CDD 4CL 37 547 - -
Cla02g00741 557 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cla02g00741 557 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Cla02g00741 557 Pfam AMP-binding enzyme 56 457 IPR000873 -
Cla02g00741 557 SUPERFAMILY Acetyl-CoA synthetase-like 26 550 - -
Cla02g00741 557 PANTHER 4-COUMARATE--COA LIGASE 3 27 550 - -
Cla02g00741 557 Gene3D - 21 451 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00741 Cla-Chr2:9012530 Cla06g01321 Cla-Chr6:26576714 0 dispersed
Cla02g00741 Cla-Chr2:9012530 Cla10g01217 Cla-Chr10:26812380 0 transposed
Cla02g00741 Cla-Chr2:9012530 Cla09g00323 Cla-Chr9:3124225 2.01E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00741 K01904 - csv:101221344 922.539