Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00782 ATGGCGGTGGAGCTTCTCACAGCCTTCACCAACGCTCAACTCTCTTCTCCAATGGACCAAGACTCCGCCGTCCAAGAAGCCGCCTCCGGCCTCGACACCCTCAAAAAGCTCATCACATTACTCTCTCACTCTCACCCTTCTAATCTCGACTCCGATTGCCAAGCCGTCGCTAACGCCGCCGTCTCCCACTTCCGAAAGGCCATTTCTCTCCTCGGCCGCACCTCTAGAACCGGCCACGCCCGATTCCGCCGTGCCCCTTTGGATTCCTCTAAAATTTACAACGCTACGCCTATTCAACAAATTCCTCCGCCCCTCGACCGCCTCGATTCCGCCACCACCATCAATTTCTCTTACTCCGCTGCTCCTAGTTCCTCCTTCTTAACCTCGCTTCCTGGTTCCGACTCTGAAATTAAGCTCCAACATCAACCTTCTTCCTCCTCTTTTCAGATTACTGATCTTTCCAGAGTTTCGTCTGTTGTCTCTAAGCCTTCTTCTGGTCTCAAGAGAAAGTGCGGTTCTGAGAATTTAGGCTCAGGGAAGTGCGCTGGATCTTCTGGTGGTCGTTGCCACTGCTCTAAGAAGAGCAGAAAAATGAGGTTGAAAAGGGTAGTGAGAGTACCAGCTATAAGCTCAAAGAACGCTGATATTCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAAAAGCCAATAAAGGGTTCTCCATATCCAAGAGGTTACTATAAGTGTAGCAGTTTAAGAGGATGTCCAGCAAGAAAGCATGTTGAGAGAGCCTCAGATGATCCATCTATGTTAATAGTGACTTATGAAGGCGATCATAATCACTCTCAATCAGTTGCAGAAGCCTCAAGTCTCATCCTTGAATCTTGGTGA 873 49.14 MAVELLTAFTNAQLSSPMDQDSAVQEAASGLDTLKKLITLLSHSHPSNLDSDCQAVANAAVSHFRKAISLLGRTSRTGHARFRRAPLDSSKIYNATPIQQIPPPLDRLDSATTINFSYSAAPSSSFLTSLPGSDSEIKLQHQPSSSSFQITDLSRVSSVVSKPSSGLKRKCGSENLGSGKCAGSSGGRCHCSKKSRKMRLKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW 290
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 9941176 9942534 - ClCG02G008030.2 Cla02g00782 266908
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00782 290 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 17 289 - -
Cla02g00782 290 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla02g00782 290 SUPERFAMILY WRKY DNA-binding domain 213 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla02g00782 290 Pfam Plant zinc cluster domain 168 215 IPR018872 -
Cla02g00782 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 289 IPR044810 GO:0003700
Cla02g00782 290 Gene3D WRKY domain 201 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla02g00782 290 SMART WRKY_cls 217 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla02g00782 290 ProSiteProfiles WRKY domain profile. 212 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cla01g01663 Cla02g00782 CCT
Cla01g01663 Cla02g00782 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00782 Cla-Chr2:9941176 Cla05g02069 Cla-Chr5:32370206 8.67E-12 dispersed
Cla02g00782 Cla-Chr2:9941176 Cla01g01663 Cla-Chr1:31522879 1.12E-109 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60622 PF03106 WRKY 2.50E-26 CL0274 Cla TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00782 - - bhj:120089490 558.525