Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00782 | ATGGCGGTGGAGCTTCTCACAGCCTTCACCAACGCTCAACTCTCTTCTCCAATGGACCAAGACTCCGCCGTCCAAGAAGCCGCCTCCGGCCTCGACACCCTCAAAAAGCTCATCACATTACTCTCTCACTCTCACCCTTCTAATCTCGACTCCGATTGCCAAGCCGTCGCTAACGCCGCCGTCTCCCACTTCCGAAAGGCCATTTCTCTCCTCGGCCGCACCTCTAGAACCGGCCACGCCCGATTCCGCCGTGCCCCTTTGGATTCCTCTAAAATTTACAACGCTACGCCTATTCAACAAATTCCTCCGCCCCTCGACCGCCTCGATTCCGCCACCACCATCAATTTCTCTTACTCCGCTGCTCCTAGTTCCTCCTTCTTAACCTCGCTTCCTGGTTCCGACTCTGAAATTAAGCTCCAACATCAACCTTCTTCCTCCTCTTTTCAGATTACTGATCTTTCCAGAGTTTCGTCTGTTGTCTCTAAGCCTTCTTCTGGTCTCAAGAGAAAGTGCGGTTCTGAGAATTTAGGCTCAGGGAAGTGCGCTGGATCTTCTGGTGGTCGTTGCCACTGCTCTAAGAAGAGCAGAAAAATGAGGTTGAAAAGGGTAGTGAGAGTACCAGCTATAAGCTCAAAGAACGCTGATATTCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAAAAGCCAATAAAGGGTTCTCCATATCCAAGAGGTTACTATAAGTGTAGCAGTTTAAGAGGATGTCCAGCAAGAAAGCATGTTGAGAGAGCCTCAGATGATCCATCTATGTTAATAGTGACTTATGAAGGCGATCATAATCACTCTCAATCAGTTGCAGAAGCCTCAAGTCTCATCCTTGAATCTTGGTGA | 873 | 49.14 | MAVELLTAFTNAQLSSPMDQDSAVQEAASGLDTLKKLITLLSHSHPSNLDSDCQAVANAAVSHFRKAISLLGRTSRTGHARFRRAPLDSSKIYNATPIQQIPPPLDRLDSATTINFSYSAAPSSSFLTSLPGSDSEIKLQHQPSSSSFQITDLSRVSSVVSKPSSGLKRKCGSENLGSGKCAGSSGGRCHCSKKSRKMRLKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9941176 | 9942534 | - | ClCG02G008030.2 | Cla02g00782 | 266908 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00782 | 290 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 17 | 289 | - | - | |
Cla02g00782 | 290 | Pfam | WRKY DNA -binding domain | 219 | 275 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00782 | 290 | SUPERFAMILY | WRKY DNA-binding domain | 213 | 277 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00782 | 290 | Pfam | Plant zinc cluster domain | 168 | 215 | IPR018872 | - | |
Cla02g00782 | 290 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 17 | 289 | IPR044810 | GO:0003700 | |
Cla02g00782 | 290 | Gene3D | WRKY domain | 201 | 278 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00782 | 290 | SMART | WRKY_cls | 217 | 277 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla02g00782 | 290 | ProSiteProfiles | WRKY domain profile. | 212 | 278 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01663 | Cla02g00782 | CCT | |
Cla01g01663 | Cla02g00782 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00782 | Cla-Chr2:9941176 | Cla05g02069 | Cla-Chr5:32370206 | 8.67E-12 | dispersed | |
Cla02g00782 | Cla-Chr2:9941176 | Cla01g01663 | Cla-Chr1:31522879 | 1.12E-109 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60622 | PF03106 | WRKY | 2.50E-26 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00782 | - | - | bhj:120089490 | 558.525 |