Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00787 ATGACCTTCATTCTTTTTCTTCTTCTTCTTCTTCTTCAATCTTCTTGCAATGGACTCAATTTCGATGGGATTCTCTTGCTTTCCTTTAAGTATGCCGTTTTGGATGATCCTCTCTTTGTTCTTCAGAATTGGAATTACTCCGACGACACCCCCTGTTCATGGCGAGGAGTCGTATGTTCCGCCGATGGTTCCGGTGGCTCTAGAGTTACAGGTTTGTCTCTTCCGAGTTCTCAGCTTATGGGCTCTGTTTCTTCTGATTTGGGTCTGATTCAAAATCTTCAATCGGTTGATCTTTCTAACAATTCCTTTAATGGGTCTCTTCCCCGGTCTCTGTTCAACGCCACCATGCTCCGGTTTCTTGATTTGTCCGATAATTTGATTTCCGGCGAGGTTCCTGGGCCAGAGGGTGACCTTAGGAATTTGCAAGTTCTTAACCTTTCCGGTAATGCTCTGTTCGGGAAGTTTCCGAGTGATCTCGTGAATTTGAGTAATCTCACGGTTGTGTCTCTCAAGAACAATTACATTTCCGGTGAAATTCCCGGTGGGTTTAAAACGGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGTCTGATTTTGGTGGCGACAGTTTACATTACTTTAACATCTCATACAACAGACTTTCCGGCGAAATTCCGCCGGATTTCGCCCACAAAATTCCGGCTAATGCCATAATTGATCTCTCCTTCAACAACCTCACCGGAGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCACCGGAAACCGCCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACGTCATCGCCATCGTCTCTCCCACCGGCCATCGCCGCCATTCCGCTAGACCCAAGTACTCCGGAAACGACCTCGCCGGAAAAGCAGAGCGAAACAGGGTTTAAACCGTCCACAATCGTGGCCATTGTACTGGGAGATGTCGTCGGATTGGCAATTCTGTGCCTCCTCTTCTTCTACGTCTTCCATTTGAAGAAAAAAAACAAAGCCGTCGAAACCCATTTGAAAAACGAACCCAATTTAGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCACGATGGTCCTGCCTCAGAAAAACAGGGGATCCAGAAGAGGCAAATTCCGATCAAGCGAGTGTGTTATCCTTCTCCGGCCATCGCGAGACGGCGGAGGAGGGTGCAGAAGAGAACAAGAGAGGAACATTAGTGACAGTAGACGGCGGAGAGAAGGAGCTGGAACTCGATACTCTACTGAAAGCATCGGCGTACATTCTGGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGCACGGCGTTTGCAGTGAGGAGAATCGGAGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAATCAGATTCGTGTTGTAGCTAAATTGGTTCACCCAAATTTGGTTCGTGTTCGTGGATTTTATTGGGGTGCTGATGAAAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCCAATGCTCGTTACAGGAAAATGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATTGCAAAAGGAGTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTCTCGGCTTCGATATGGAGCCCAAGATAGGCGATTTCGGCCTTGACAAGCTCTTCTTGGGTGACTCCAGCTATAAACCCGGTGGCTCCACTCGAAATTTCGGGAGTAAAAGGTCTACAGCGTCTCGGGATAGCTTCCAAGATTTTGTCACCGGACCGAGCCCTGGACCGAGCCCGAGCTCGATCAGTGGGGTATCGCCGTATTTAGCACCGGAGTCGCTTCGGAGCTTGAAGCCCAACTCGAAATGGGATGTCTACTCTTTTGGTGTGATATTGCTTGAGTTACTAACCGGAAAGATTGTAGTGTTGGATGAGTTGGGGCAAGGGCTTGGGCTTGCTAGCGAGGACAAGAGTCGAACCTTAAGAATGGCCGACATGGCGATTCGAGCAGACGTGGAAGGTAGAGAAGAAGCATTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCATGTCAATGTCATCACACTATTATGGTCTCTAG 2244 47.91 MTFILFLLLLLLQSSCNGLNFDGILLLSFKYAVLDDPLFVLQNWNYSDDTPCSWRGVVCSADGSGGSRVTGLSLPSSQLMGSVSSDLGLIQNLQSVDLSNNSFNGSLPRSLFNATMLRFLDLSDNLISGEVPGPEGDLRNLQVLNLSGNALFGKFPSDLVNLSNLTVVSLKNNYISGEIPGGFKTVEVLDLSSNLINGSLPSDFGGDSLHYFNISYNRLSGEIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDVVGLAILCLLFFYVFHLKKKNKAVETHLKNEPNLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHRETAEEGAEENKRGTLVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGADEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIVVLDELGQGLGLASEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTMSMSSHYYGL 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10077419 10080228 - ClCG02G008070.1 Cla02g00787 266913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00787 747 MobiDBLite consensus disorder prediction 610 630 - -
Cla02g00787 747 Gene3D Transferase(Phosphotransferase) domain 1 511 743 - -
Cla02g00787 747 SUPERFAMILY Protein kinase-like (PK-like) 440 733 IPR011009 -
Cla02g00787 747 Gene3D Phosphorylase Kinase; domain 1 404 510 - -
Cla02g00787 747 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Cla02g00787 747 MobiDBLite consensus disorder prediction 381 414 - -
Cla02g00787 747 MobiDBLite consensus disorder prediction 290 311 - -
Cla02g00787 747 PANTHER BNAC07G16060D PROTEIN 4 737 - -
Cla02g00787 747 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 737 - -
Cla02g00787 747 SUPERFAMILY L domain-like 28 270 - -
Cla02g00787 747 CDD STKc_IRAK 441 735 - -
Cla02g00787 747 Pfam Protein kinase domain 441 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00787 747 Pfam Leucine Rich repeats (2 copies) 115 155 IPR025875 -
Cla02g00787 747 MobiDBLite consensus disorder prediction 297 311 - -
Cla02g00787 747 ProSiteProfiles Protein kinase domain profile. 435 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00787 747 Gene3D Ribonuclease Inhibitor 184 279 IPR032675 -
Cla02g00787 747 Gene3D Ribonuclease Inhibitor 20 183 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00787 Cla-Chr2:10077419 Cla05g01097 Cla-Chr5:11361460 0 dispersed
Cla02g00787 Cla-Chr2:10077419 Cla01g00577 Cla-Chr1:6507054 3.47E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80337 PF00069 Pkinase 6.50E-30 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00787 - - bhj:120088533 1345.49