Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00794 | ATGGGAACCCTTTCCTTCCCAATTGCGTCCTCAAAATCCCGACTCTTATCGACTCCGAATCCAATTGCTTTTTCTATCCGTTTTCTTCAAACATCTTTCCCTTCTTCTGCAATTCGCCTTCGTAATTCTCCCATTCTCCATCTACGGCGACGTCTTCTCTGTTCTGCTGCAGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCAGCACCACCAGCACCAGCAGCACCACCACCACCATGGTCATCACCATTGTGATCATGATGTGGAGCTGTCTGGGCCTCAGAAAGCGGTGATTGGATTTGCTAAAGCCATTAGGTGGACAGACTTGGCTAGCTATCTCCGGGAACACCTGCAATTATGTTGCTGCTCTATGGCTTTGTTTGTAGCTGCTGCTGTTTCCCCATATTTGGTGCCGAAGCTCATTGCAAAGCCTTTGCAAAATGCTTTCATTGTCATTGCTTTTCCTTTAGTCGGGGTCTCCTCATCCCTTGATGCTTTAACTGATATTAGTGGTGGAAAAGTAAACATCCATACACTTATGGCTCTTGCAGCCTTTGCTTCCATCTTTATGGGGAACGCCTTGGAAGGAGGACTACTACTTGCCATGTTTAATTTGTCTCACATTGCGGAAGAGTATTTTACAAGTCGTGCAATGATTGATGTCAAAGACTTGAAGGAAAACTATCCAGACTCTGCCCTTGTTTTAGATACAAATGATGGTAAACTTCCAAATATTACAGATTTATCCTACCAAAAGGTGCCTGTCCATGATATAGAGGTGGACTCCTATATATTGGTTGGAGCTGGTGAGTTTGTGCCTATAGATTGTGAAGTTTTCCAAGGTAGTGCTACAGTCACCATTGAGCACCTAACCGGTGAAATCAAACCATTGGAGATTACGGTTGGAAGCAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCGTGAAGGCAACAAAGACCTGGAAAGAGTCAACTTTGAGTCGTATAGTGAACTTGACTGAAGAAGCACAACTGAATAAACCAAGACTTCAGAGGTGGCTTGATGAATTTGGTGAGCATTATAGCAAAGCAGTTGTAGTATTGGCCATTGCTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATTGGTACATCAGCTTGTAGAGGATCGGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCAGTTGCACCATTGGCTTATGCTATTGCAATTAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGGCGTGTATTAGATGCTTTAGCTTCTTGTCACACTATAGCTTTTGATAAAACTGGGACGTTGACTACTGGGGGGCTCATTTTCAAAGCGATTGAACCAATTTACGGACATGAGGTTGGAGAAAACAAATCAGACTTTGGTTCCTGTTGCATTCCCTGCTGTGAAGAAGAAGCTCTTGCTGTAGCAGCTGCCATGGAGAAGGGTACTACTCACCCCATTGGAAGGCCTGATGGGCTCAAGGACATGATGTGTGTGGCCCAACCTGTGGAAGATAGTATGGAAGTTGCCAAGCTGCCCAAGAAGACAGGTCAAGTAAGGAAACCAAACAGGAACCCAAAGAACTTGGTTCTGAGGGAAGAGGAGACCAGTGCACTAGCTGTTGTCGACCATAGTATGGGAAAAGACCTCCCATCCTTTTCTGTCCAGAATTTGGAATATTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTGAGTCGGGAACTGAAGGTGGGAAACTATTGAAAGCATCTCTTGGGTCCTTAGATTTCATCACTTCATGCTACAAATCAGAAACCAAATCAAAAGAGATCAAAGAAGCTGCGAGCACATCTTCATATGGAAGTGAGTTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTGTAATAGCTGAATTAACAGATAGGGCTAAACTCCATGTAATGATGTTGACTGGAGATCATGAGTCAAGTGCACGGAGAGTGGCAAACGCAGTGGGCATCAAGGAAGTCCACTTCAGTCTAAAGCCTGAAGACAAGCTTAGTCACGTCAAAAGTATCTCTAGGGAGAATGGAGGAGGACTAATTATGGTTGGTGAAGGCATTAATGATGCACCAGCCCTTGCTGCTGCTACCGTAGGCATAGTGCTTGCTCAACGTGCTAGTGCAACGGCTATAGCTGTGGCTGATGTTCTGTTGCTGCGGGATAACATATCTGGTGTACCATTCTGTATTGCCAAGTCTCGCCAGACGACTGCCCTAGTTAAACAGAATGCTAGTCTTGCTTTGTTTTCAATATTTGTGGCCTCTCTTCCTGCAGTTCTAGGGTTTCTTCCATTGTGGTTAACGGTACTTCTGCACGAAGGTGGTACTCTTCTCGTTTGCCTCAATTCCATACGTGCTCTGAATAATCCTAGTTGGTCCTGGAAGCAGGACTTGAAGCAATTGCTAATGGAGCTGAAATTTAAAGACTCGCAGCCTAGCCATAATGCCAGCTCTACTACTCTACAATCTTCCCCTGTATAG | 2616 | 44.99 | MGTLSFPIASSKSRLLSTPNPIAFSIRFLQTSFPSSAIRLRNSPILHLRRRLLCSAAETGRSNHDDHHHVHDHQHHQHQQHHHHHGHHHCDHDVELSGPQKAVIGFAKAIRWTDLASYLREHLQLCCCSMALFVAAAVSPYLVPKLIAKPLQNAFIVIAFPLVGVSSSLDALTDISGGKVNIHTLMALAAFASIFMGNALEGGLLLAMFNLSHIAEEYFTSRAMIDVKDLKENYPDSALVLDTNDGKLPNITDLSYQKVPVHDIEVDSYILVGAGEFVPIDCEVFQGSATVTIEHLTGEIKPLEITVGSRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLAIAIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALASCHTIAFDKTGTLTTGGLIFKAIEPIYGHEVGENKSDFGSCCIPCCEEEALAVAAAMEKGTTHPIGRPDGLKDMMCVAQPVEDSMEVAKLPKKTGQVRKPNRNPKNLVLREEETSALAVVDHSMGKDLPSFSVQNLEYFPGRGLVATLHGTESGTEGGKLLKASLGSLDFITSCYKSETKSKEIKEAASTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSVIAELTDRAKLHVMMLTGDHESSARRVANAVGIKEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCIAKSRQTTALVKQNASLALFSIFVASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWKQDLKQLLMELKFKDSQPSHNASSTTLQSSPV | 871 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10286516 | 10314685 | - | ClCG02G008150.1 | Cla02g00794 | 266920 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00794 | 871 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 182 | 830 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cla02g00794 | 871 | PRINTS | P-type cation-transporting ATPase superfamily signature | 728 | 747 | - | - | |
Cla02g00794 | 871 | PRINTS | P-type cation-transporting ATPase superfamily signature | 752 | 764 | - | - | |
Cla02g00794 | 871 | PRINTS | P-type cation-transporting ATPase superfamily signature | 674 | 684 | - | - | |
Cla02g00794 | 871 | PRINTS | P-type cation-transporting ATPase superfamily signature | 448 | 462 | - | - | |
Cla02g00794 | 871 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 255 | 471 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla02g00794 | 871 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 634 | 808 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla02g00794 | 871 | MobiDBLite | consensus disorder prediction | 73 | 88 | - | - | |
Cla02g00794 | 871 | Gene3D | - | 660 | 779 | IPR023214 | - | |
Cla02g00794 | 871 | Gene3D | - | 441 | 458 | IPR023214 | - | |
Cla02g00794 | 871 | SFLD | p-type atpase | 430 | 781 | IPR044492 | - | |
Cla02g00794 | 871 | Gene3D | - | 552 | 659 | IPR023299 | GO:0000166 | |
Cla02g00794 | 871 | Gene3D | - | 459 | 509 | IPR023299 | GO:0000166 | |
Cla02g00794 | 871 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 185 | 812 | IPR023298 | - | |
Cla02g00794 | 871 | MobiDBLite | consensus disorder prediction | 60 | 92 | - | - | |
Cla02g00794 | 871 | Pfam | E1-E2 ATPase | 252 | 428 | - | - | |
Cla02g00794 | 871 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 450 | 456 | IPR018303 | - | |
Cla02g00794 | 871 | SUPERFAMILY | HAD-like | 446 | 828 | IPR036412 | - | |
Cla02g00794 | 871 | SFLD | C1.7: P-type atpase like | 430 | 781 | - | - | |
Cla02g00794 | 871 | SUPERFAMILY | Calcium ATPase, transduction domain A | 252 | 341 | IPR008250 | - | |
Cla02g00794 | 871 | Gene3D | - | 220 | 346 | - | - | |
Cla02g00794 | 871 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 558 | 858 | - | - | |
Cla02g00794 | 871 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 41 | 509 | - | - | |
Cla02g00794 | 871 | Pfam | haloacid dehalogenase-like hydrolase | 567 | 741 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00739 | Cla-Chr2:8979134 | Cla02g00794 | Cla-Chr2:10286516 | 0 | dispersed | |
Cla02g00794 | Cla-Chr2:10286516 | Cla05g01629 | Cla-Chr5:27669456 | 1.40E-45 | dispersed | |
Cla02g00794 | Cla-Chr2:10286516 | Cla06g01348 | Cla-Chr6:26954434 | 3.99E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00794 | K01534 | - | jre:109009121 | 1134.4 |