Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00800 ATGGATTCTCTCTCGGCTCTCCTTCTACTCTTTCTTGTTTTCCTTTTTCTGCGGCAACTCAGAACCCGCCGGAGAAATCTGCCGCCGAGCCCACCGTCAGTTCCGATTATTGGCCATCTTCACCTCCTTGAACGCCCAACCCACCGGAACTTCCAAAACATCGCCGCCAAATACGGACCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCCCTTATAGTCTCTTCACTCCAAATAGCCCAAGAATGCTTCACCAAAAACGACCTCATTTTCGCCAACCGCCCGCGTATGCTCTCCGGAAAATACCTCGGCTACGACTGCACCACCATGGCCACCGCCTCTTACGGCGACCACTGGCGAAACCTCCGCCACCTCGCCGCCATGGAGATCTTCTCCTCGACGCGCCTCAACGCCTCTCTCGGCATCCGGAAGGATGAAATCCGGCGATTGTTGGTTAAACTCCATTCGGAATCGTTCTCTAAGGTGGAGTTGAAATCGATGTTTTCGGAACTGAGTTTCAACATCGTGATGAGGATCGTGGCCGGAAAACGGTACTACGGCGAAGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAACTTATGGAAGAGGTTTCACGTCATGGAGGAACTACGCAATGGGTGGATTTCATGCCGATTTTGAAATGGATTGGGTTTGATGGATATGAGAAGAGTTTGGCCAAATCGGCGATAAGGGCCGATCGATTCGTGCAGGAATTGGTTGAAGAACGACGGAATAAGAAAGTATTGGGAAGAGAAGAACAGAGTTGTCTGCTTCATCGGCTTCTGGAATTGCAGCTCTCTGAACCCGAATATTACAGTGATGAGATCATCAAAGGGATCGTTCTGGTTTTGTTGCGTGCAGGAACAGACACGTCATCTGTGAGCTTGGACTGGATAATGACTCAACTACTGAACCATCCAGAGGTATTAGCCAAAGCCAAAGCTGAAATAGACACCAAGATTGGCCAAGATCGATCCCTTCAGGAAACAGATATCGCCAACCTTAGCTATCTTCAAGCCATTATTTCTGAAACCTTTCGGTTGCACCCTCCAGCCCCAATGCTCCTCACACACTATTCTTCCCACGACTGCACCGTCGCAGGCTACAACATTCCACGTGGCACAATGTTGTTGGTCAATGCTTGGGCAATTCACAGAGACCCCAAGTTGTGGGACGACCCGACGACCTTCCGACCGGAGAGATTCTTGGGGGCAGGGAATGAGTTGCAAGCCAATAAACTCATTCCTTTCGGAGTTGGAAGGAGGGCTTGTCCTGGGGAAACTATGGGTTTACGTGTTATAGGACTGACTTTGGGTCTACTGATTCAGTGCTATGAGTGGAAAAAGGTTGGATATGAAAATGTAGACATGACTGAAGGTGGAGGTATCACCATTCTCAAACTGAAGCCTTTGGAAACCATGTGTAAAGCTCGACCAATTATGGATAAAGTTTTATGTAATGGTTTGGACTAA 1500 49.2 MDSLSALLLLFLVFLFLRQLRTRRRNLPPSPPSVPIIGHLHLLERPTHRNFQNIAAKYGPIFTLRFGSRLALIVSSLQIAQECFTKNDLIFANRPRMLSGKYLGYDCTTMATASYGDHWRNLRHLAAMEIFSSTRLNASLGIRKDEIRRLLVKLHSESFSKVELKSMFSELSFNIVMRIVAGKRYYGEEVSDEAEAREFRELMEEVSRHGGTTQWVDFMPILKWIGFDGYEKSLAKSAIRADRFVQELVEERRNKKVLGREEQSCLLHRLLELQLSEPEYYSDEIIKGIVLVLLRAGTDTSSVSLDWIMTQLLNHPEVLAKAKAEIDTKIGQDRSLQETDIANLSYLQAIISETFRLHPPAPMLLTHYSSHDCTVAGYNIPRGTMLLVNAWAIHRDPKLWDDPTTFRPERFLGAGNELQANKLIPFGVGRRACPGETMGLRVIGLTLGLLIQCYEWKKVGYENVDMTEGGGITILKLKPLETMCKARPIMDKVLCNGLD 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10442888 10446938 - ClCG02G008210.2 Cla02g00800 266926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00800 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 492 - -
Cla02g00800 499 Gene3D Cytochrome P450 20 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 Pfam Cytochrome P450 28 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Cla02g00800 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 492 - -
Cla02g00800 499 SUPERFAMILY Cytochrome P450 28 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00800 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g01676 Cla02g00800 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00800 Cla-Chr2:10442888 Cla01g01675 Cla-Chr1:31678165 0 dispersed
Cla02g00800 Cla-Chr2:10442888 Cla02g00801 Cla-Chr2:10461207 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00800 K13260 - csv:101210967 848.195