Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00801 ATGGATTCTCTCAACGCTCTCTTTCTCCTTCTTGCTTTCCTTTTACTGCTACAACTCCATTCGGAATCGTTCGCTAAGGTGGAGTTGAAATCGATGTTTTCGGAACTGAGTTTCAACACCGTGATGAGGGTCGTGGCCGGAAAACGGTATTACGGCGAGGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGCTTATGGAGGAGATTTCTCGCCATGGAGGAGCTTCTCAATGGATCGATTTCATGCCGATTTTGAAATGGATTGGATTTGACGGATATGAGAAGAGTTTGGCCAAATTGACGAAAAGGGCCGATCGATTTATGCAGGAATTGGTTGAAGAGCGGCGGAATAAGAAAGTGTTGGCAAAAGAAGAACAGAGTTCTCTGCTTCATCGGCTTCTTGAATTGCAGCTCTCTGAACCCGAATACTACACCGATCAGATCATCAAAGGGATCGTTCTGGTTCTATTGCGTGCAGGAACAGACACATCATCTGTGACCTTGGATTGGGCCATGACTCAACTACTCAACCATCCGGAGGTATTAGTTAAAGCCAAAGCTGAGATAGACACCAAGATTGGTCAAGATCGACCCCTTGAGGAAGCAGATCTCAACAACCTTAACTACCTTCAAGCTATAATTTCTGAGACCTTTCGATTGCACCCCGCAGCACCGATGCTCCTCTCGCACTATTCCTCTGACGACTGTACTGTCGCAGGCTACAACATTCCACGTGGGACGACGTTGTTGGTCAATGCTTGGGCAATTCATAGAGACCCGAAGCTGTGGGACGACCCGACGAGCTTCCGACCGGAGAGATTCTTGGGGGCAGGGAATGGGTTGCAGTCCAATAAACTCATTCCTTTTGGAATTGGAAGGAGGGCTTGTCCTGGGGAAACTATGGCTTTACGTTTTATAGGATTGACTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAAAAGGCTGGAGGATGTGAAAAGGTTGACATGACTGAAGGTGGAGGTATCACCATTCATAAAGTTAAGCCTTTAGAAACTATGTGTAAAGCTCGTCCAATTATGGATAAAGTTCTATCAAATGGTTTGGACTAA 1098 46.54 MDSLNALFLLLAFLLLLQLHSESFAKVELKSMFSELSFNTVMRVVAGKRYYGEEVSDEAEAREFRELMEEISRHGGASQWIDFMPILKWIGFDGYEKSLAKLTKRADRFMQELVEERRNKKVLAKEEQSSLLHRLLELQLSEPEYYTDQIIKGIVLVLLRAGTDTSSVTLDWAMTQLLNHPEVLVKAKAEIDTKIGQDRPLEEADLNNLNYLQAIISETFRLHPAAPMLLSHYSSDDCTVAGYNIPRGTTLLVNAWAIHRDPKLWDDPTSFRPERFLGAGNGLQSNKLIPFGIGRRACPGETMALRFIGLTLGLLIQCYEWKKAGGCEKVDMTEGGGITIHKVKPLETMCKARPIMDKVLSNGLD 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10461207 10463224 - ClCG02G008220.2 Cla02g00801 266927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00801 365 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 150 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 170 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 254 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 288 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS E-class P450 group I signature 298 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 358 - -
Cla02g00801 365 Gene3D Cytochrome P450 9 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 SUPERFAMILY Cytochrome P450 16 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 18 358 - -
Cla02g00801 365 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 291 300 IPR017972 GO:0005506|GO:0016705
Cla02g00801 365 PRINTS P450 superfamily signature 161 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS P450 superfamily signature 289 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 Pfam Cytochrome P450 20 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00801 365 Coils Coil 92 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00801 Cla-Chr2:10461207 Cla01g01676 Cla-Chr1:31686953 8.00E-126 dispersed
Cla02g00800 Cla-Chr2:10442888 Cla02g00801 Cla-Chr2:10461207 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00801 K13260 - csv:101210967 574.704