Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00803 ATGGAAAACCTTATGCTTTATCTCTGTCTCTCTCTTATCACATTCATATCAGTTTTCACATTTCTAGTGCGACCCTCCATAAACCTTCCCCCAAGTCCACCCTTTTCTCTCCCAATTATAGGCCATCTCTATCTCCTAAAACGCCCCATCCATCAAACCCTTCAAAAGCTTTCCAAGAAATATGGCCACGTCTTCTCTCTCCACTTAGGCTCTCAACTCGTTGTCGTCGTTTCTTCTCCTTCCGCCGTCAAAGAATGCTTCACAGTGAATGATATCATTCTTGCAAATCGGCCGCTGTCCAACATTACCAAGCACTTGACTTACAACAACACAATCTTCTCGGCGTCCCCTTATGGCGACTATTGGCGAGACCTCCGCCGAATTAGCATCATAGAGATTTTCTCAGCCACTCGCCTTAATATGTTTTTGGAGATTAGGAAAGACGAAATCAAACGCCTACTTGGTAAGTTGTGTGGCATTTCAAGTGATGGTTTTGCGAGAGTTGAGATGGGATCTATATTTTCTGAGTTGTCGTCTAATATTGTGATGAGAATGGTTATGGGGAAGAGGTTTTATGGAGAGGATGTGATGGATGTAGAACAAGCAAGGGAATTTAGAGATATTGTGAAACAAGTCATGGAAAATTGTGGGACTTACAATTCAAGAAGTTTTATACCCTTGTTGAATTGGATTGACATAACTCGTTATGAGAAGAGGGTAATAAAACTAGGACAACGAAACGATCAATTTTTGCAAGGGTTGATTGATGAGCATAGGAATCAAAAGGAGGAAGGTAGAAATACTATGATTGATCATTTACTTTCCTTGCAAGAATCCCAGCTTGATTTTATGAGTGATCAAGTTATCAAAGGTCTTATAACGGTAATATTACTTGCAGGCACCGACACAATAGCTGTGACTATGGAATGGGCATTGTCCCATTTGCTCAACAATCCTGATGTGCTAAACAATGCTAGGATTGAGTTGGACTCAATAATTGGACAAGAGCGATTGGTTGATGAATCTGATTTGTCGAAATTGAGTTATTTAGAAGGAGTAATCTATGAAACATTACGATTAAACCCAGCAGCTCCTTTACTAGTGCCACATTATGCATCTAAAAATTGTTCAATAGCGGGCTACGAAATCCCCTGCGATACGATCGTCTTGATTAATGCTTGGGCAATACATAGAGATCCAAACATATGGGAAGATGCAACTACATTTAACCCCGAAAGACATAAGAACCCCAAGGTAGATGAGTTATTGTACAAACTAATACCTTTCGGTGTCGGGCGAAGAGCTTGCCCTGGTGTGGGAATGGCTCATCGTGTAGTTGGCTTGGCCTTGACATCATTGATTCAATGCTTTGAATGGAAGAGGGTGAATAGTGAACTTGTGGACATGGCCGAGGGCGTTGGGCTCACAATGCCTAGAGCTCAACCATTGCAAGCCATGTGTAAATCCCGACCAATCATGAATAGGGTTCTCATTTAA 1497 41.48 MENLMLYLCLSLITFISVFTFLVRPSINLPPSPPFSLPIIGHLYLLKRPIHQTLQKLSKKYGHVFSLHLGSQLVVVVSSPSAVKECFTVNDIILANRPLSNITKHLTYNNTIFSASPYGDYWRDLRRISIIEIFSATRLNMFLEIRKDEIKRLLGKLCGISSDGFARVEMGSIFSELSSNIVMRMVMGKRFYGEDVMDVEQAREFRDIVKQVMENCGTYNSRSFIPLLNWIDITRYEKRVIKLGQRNDQFLQGLIDEHRNQKEEGRNTMIDHLLSLQESQLDFMSDQVIKGLITVILLAGTDTIAVTMEWALSHLLNNPDVLNNARIELDSIIGQERLVDESDLSKLSYLEGVIYETLRLNPAAPLLVPHYASKNCSIAGYEIPCDTIVLINAWAIHRDPNIWEDATTFNPERHKNPKVDELLYKLIPFGVGRRACPGVGMAHRVVGLALTSLIQCFEWKRVNSELVDMAEGVGLTMPRAQPLQAMCKSRPIMNRVLI 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10501216 10503493 - ClCG02G008240.2 Cla02g00803 266929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00803 498 Pfam Cytochrome P450 31 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cla02g00803 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 495 - -
Cla02g00803 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 495 - -
Cla02g00803 498 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 SUPERFAMILY Cytochrome P450 30 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00803 498 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00803 Cla-Chr2:10501216 Cla02g00805 Cla-Chr2:10596922 0 dispersed
Cla02g00803 Cla-Chr2:10501216 Cla02g00804 Cla-Chr2:10537173 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00803 K13260 - mcha:111017884 629.787