Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00805 ATGGATGGCATTTTGGTTTACATTTTCCTGTTTATGATCTCTCTCCTTCTAGCCCTAAAACTTTTGCTAAGCCATGGCAAAAACCTTCCTCCAAGCCCATTTTTTTCCCTTCCATTAATAGGCCATCTCCATCTCCTCAAACATCCCATCCACCAAACTCTTCACAATCTCTCAAAAAAGTATGGGCATGTCTTTTCTCTTTGGTTTGGTTCTCGTCTTGTTGTCGTTGTATCATCTCCTTCCGCGGTCCGCGAATGCTTCACGAAAAATGACATCGTTCTTGCAAATCGACCATTTTTGAACACGGGAAAGCACTTGACATATAACTTTACAGTACTAGCCGTTGCCCCTTACGGAGAGCTTTGGCGTAGCCTTCGCCGCATTAGTACTTGTGAGATTTTCTCGACAAGTCGACTCAATTTGTTCTCGGGGATTCGACAAGACGAAGTGAAGCGATTGTTGTGTAAATTGTGTAATGGCAATTCGGTTGAAGAATTATTAATTCCTACAGTTGTGGAGGTTGAGCCAATGTTGTTGGATTTTACTTGTAATATTGTCATGAGAATGGTTGCTGGAAAGAGGTATTTTGGAGATGATGTGTTGGATGAAGGACAAGCAGGGAAATTTAGCGATGTTGTGAAGCGAGTAATGATGTGTGCAGGAGCAACTAATCCTGGAGATTTTATACCTTTATGGAATTGGATTGATCCAACTGGTCTTGAGAAGAAGATAATGAAAGTTGGGGAGGAAGTTGATGCAATCTTTCAAGGTTTAATTGATGAGATTCGGAATCAACAAGAAGGTGGGAATACGATGATTCATCATTTACTTCACTTGCAGACCACTCAACCTGAATACTTCAGTGATCAAATCATCAAAGGCCTCATACATGTTATACTTTTAGCAGGAATCGATACAACAGCCGTGACATTAGAATGGGCACTCTCACACTTGCTCAACAATCCAGAGGTGATAAAGAAAGCGAGACTTGAAATAGAGTGTTGTACTGGACAAAAACGTCTAGTCAATGAAGAGGATTTGTCAAGTTTGAGTTATTTGCAAGGAATAATCTTAGAAACTTTGCGACTAACCCCAGCAGCCCCTCTGCTTGTGCCACATTGCGCATCCGAAGATTGCCAAATAGAAGGCTATGATATACCACGTGACACAATCATATTTGTTAATGCATGGGCAATACATAGAGATCCAAATCTATGGGAAGATGTCACTAGTTTTAAGCCTGAAAGGCATGAAAATGCAGTTGAATTATCTGATTCATACAAACTATTACCATTTGGGTTGGGGAGGAGGGCATGCCCTGGTGTAGGAATGGCGCAACGTGTGGTTGGCTTGACATTGGCATCGTTGATTCAATGCTTTGATTGGGAAAGAATGAATAGCTCATTAGTTGATATGAGTGAAGGCCAAGGGATCACTATGCCAAAAGCTCAACCTTTGGTAGCCAAGTGTAAACCACGCCCTATCATGAGAGCTCTTGTTAGTGAAGTTATTCACCCCATTTAA 1524 41.34 MDGILVYIFLFMISLLLALKLLLSHGKNLPPSPFFSLPLIGHLHLLKHPIHQTLHNLSKKYGHVFSLWFGSRLVVVVSSPSAVRECFTKNDIVLANRPFLNTGKHLTYNFTVLAVAPYGELWRSLRRISTCEIFSTSRLNLFSGIRQDEVKRLLCKLCNGNSVEELLIPTVVEVEPMLLDFTCNIVMRMVAGKRYFGDDVLDEGQAGKFSDVVKRVMMCAGATNPGDFIPLWNWIDPTGLEKKIMKVGEEVDAIFQGLIDEIRNQQEGGNTMIHHLLHLQTTQPEYFSDQIIKGLIHVILLAGIDTTAVTLEWALSHLLNNPEVIKKARLEIECCTGQKRLVNEEDLSSLSYLQGIILETLRLTPAAPLLVPHCASEDCQIEGYDIPRDTIIFVNAWAIHRDPNLWEDVTSFKPERHENAVELSDSYKLLPFGLGRRACPGVGMAQRVVGLTLASLIQCFDWERMNSSLVDMSEGQGITMPKAQPLVAKCKPRPIMRALVSEVIHPI 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10596922 10599119 + ClCG02G008260.1 Cla02g00805 266931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00805 507 Pfam Cytochrome P450 31 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 498 - -
Cla02g00805 507 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00805 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 498 - -
Cla02g00805 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Cla02g00805 507 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01675 Cla-Chr1:31678165 Cla02g00805 Cla-Chr2:10596922 0 dispersed
Cla02g00803 Cla-Chr2:10501216 Cla02g00805 Cla-Chr2:10596922 0 dispersed
Cla02g00805 Cla-Chr2:10596922 Cla02g00809 Cla-Chr2:10698595 0 dispersed
Cla02g00804 Cla-Chr2:10537173 Cla02g00805 Cla-Chr2:10596922 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00805 K13260 - csv:105434396 866.3