Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00808 ATGGATCTTCTTTTGCTCTCTATTTCTCTAATCTCTCTATTCTCTCTTCTCCTTGCCTTCAACTTCTTCCAGCAACCTCATCACAAAAACCTCCCACCAACTCCATCTTTTTCTCTTCCATTAATAGGCCATCTCCATCTCCTCAAACATCCTGTCCATCAAACACTTCAAAGCCTCTCCCAAAAGCATGGCCATGTCTTTTCTCTCCGATTCGGCTCACGTCTTGTTGTAGTTGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAACGATGTGATTCTTGCCAATCGCCCATTGTTCAAGAGTTCGAAATACTTAACCTACAACTATACCAACTTAGCCATCTCTCCTTATGGAGAACATTGGCGAAACCTCCGCCGAATCAGCACCCTTGAGATTTTCTCCGCAAGTCGCCTTAATCTTTTCAGGGGAATTAGGGAAGATGAAGTCAAACGGTTGTTGTGTAAATTGTGGGATAAATATTCGTTTGAAGAGTTTAAGGTAGTGGAGATGGTGCCAATATTTATGGATCTTATGTTCAATATTGTTATGAGAATGATGGCGGGAAAGAAGTATTGTGGTGATGATTTGGAAGATGAGGAACGATCTAAGAAATTTAAAGAGATGGTGACACAAGTTCTTGCAATTAGTGCAATGGGAAATCCAGGAGATGTTATACCTTTATGGAATTGGATTGATCCAACTTGTTACGAGAAAAGGGTAAAAAAGCTTGCAAAGACATCAGATGAACTTCTTCAACAACTAATTGATGAGATTAGGAATCAAAATGATGGAGAAAACACCATGATTCAACATTTACTTGGTTTGCAGAATACCCAACCTGAATGTTATAGTGACCAAATTATCAAAGGCCTCCTACAAGTAGCAATTTTAGCAGGAATAGACACAATTGCAGTGACCTTAGAATGGGCACTATCTCAATTGCTCAATAATTCAGAGGTGTTGAAGAAAGCTAGAGATGAGATAGATAGTTCCATTGGGCAAGATCGTTTTGTTAACGAAGCTGATTTGTCGAGTTTGAGTTACTTGGAAGGAATAATCTCTGAGACCCTACGATTGAACCCAGCCGCTCCCCTTCTGCTGCCACATTGTGCCTCTGAAGACTGCAAAATAGGAGGCTACGATGTACCACGTGACACGATGGTATTAATCAATGCTTGGGCCATACACAGAGACTCAAGTCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGACATGAAAATGCAATTGGAGTTGATTTGTACAAACTATTACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAATGGGAATGGCACAACGTGTAATTGCATTGACTCTGGCGTCGTTGATTCAATGCTTTGAGTGGCAAAGACTCAGCAACTCATTGGTGGACATGACAGAAGGCCAAGGACTCACTATGCCGAAAGCTCAACCATTGACAGCCAAGTGTAGACCTCGTTCAATCATGAAAAAACTATTGCCAATGAAACAATAA 1509 41.09 MDLLLLSISLISLFSLLLAFNFFQQPHHKNLPPTPSFSLPLIGHLHLLKHPVHQTLQSLSQKHGHVFSLRFGSRLVVVVSSSSLVQECFTKNDVILANRPLFKSSKYLTYNYTNLAISPYGEHWRNLRRISTLEIFSASRLNLFRGIREDEVKRLLCKLWDKYSFEEFKVVEMVPIFMDLMFNIVMRMMAGKKYCGDDLEDEERSKKFKEMVTQVLAISAMGNPGDVIPLWNWIDPTCYEKRVKKLAKTSDELLQQLIDEIRNQNDGENTMIQHLLGLQNTQPECYSDQIIKGLLQVAILAGIDTIAVTLEWALSQLLNNSEVLKKARDEIDSSIGQDRFVNEADLSSLSYLEGIISETLRLNPAAPLLLPHCASEDCKIGGYDVPRDTMVLINAWAIHRDSSLWEDATSFKPERHENAIGVDLYKLLPFGLGRRACPGMGMAQRVIALTLASLIQCFEWQRLSNSLVDMTEGQGLTMPKAQPLTAKCRPRSIMKKLLPMKQ 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10676882 10679031 + ClCG02G008290.1 Cla02g00808 266934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00808 502 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 497 - -
Cla02g00808 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cla02g00808 502 Pfam Cytochrome P450 32 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 497 - -
Cla02g00808 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00808 502 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00808 Cla-Chr2:10676882 Cla01g01676 Cla-Chr1:31686953 0 dispersed
Cla02g00807 Cla-Chr2:10619239 Cla02g00808 Cla-Chr2:10676882 0 tandem
Cla02g00808 Cla-Chr2:10676882 Cla02g00809 Cla-Chr2:10698595 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00808 K13260 - csv:101205391 829.32