Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00809 ATGGATTTCAATATCTTACTTTACATTTTGCTCTCTCTTGTCTGTCTTCTACTTGGCTACTCCTTTTTACTTAAACCTGATCGCTTAAACCTACCACCAACTCCACTCTTTTGCCTTCCATTCATAGGCCATCTCCATCTTCTCAAGCATCCTGTCCACAAAACATTTCAGAATCTCTCCCAAAAGTATGGCCATGTCTTCTCGCTCAAATTCGGTTCCCGTCTCGTCGTACTCGTATCTTCTCCTTCCGCCGTCCAAGAATGTTTTACAAAGAATGATATCATTCTTGCAAATCGACCATCTTTGAACGCTGGAAAGTACTTAGCATACAATAATACCACTATGGCAGTCTCCCCTTATGGTGACCATTGGCGAAACCTCCGCCGAATTAGCACCCTCGAGATTTTCTCAACAACTCGACTTAATTCGTTTTCGAGAATTCGAGAAGATGAGGTCAAACGATTTCTACGTAAATTATGTGGTAATTATTATATGTTGGACGATCATGAGTTTAGAGTAGTGGAATTGGAGTCAATGTTGTTGGATCTTACCTTCAATATTGTGATGAGAATGTTGGGTGGAATGAAGTTTTGTGAAGAGAAGAATAATACTTCGTCAGAGGATGAAGGATATTCTAAAAGATTTAGAGAGTTGGTGACACAAATTATGGCACATAGTGGGTCAACAAATCCAGGGGATTTCATACCCTTATGGAATTGGATTGATCCTACTGGTTTTAATAAAAGGATAATGAAACTTGGAAGAAGATCAGATGAACTTCTTCAAGGATTAGTTGATGAGATCAGGAGTCAAGAAGATGAAGGAAACACTATGATTCACCATTTACTTCGCTTACAAAACACTGATCCTAAATATTATAATGACCTGGTTATCAAAGGTCTCATACAAGATATATTAATAGCAGGGATTGACTCAACGGCTGTGACATTACAATGGGCACTATCTCATTTACTTAACAATCCAATCGCATTAGAGAAAGCCACGACTGAGATGGATCTTCTTGTTGGACAAGAACGTGTGGTGAATGAAGTTGATTTATCGAATTTAAGTTACCTGCGAGGAATAATCTCTGAGACTCTACGGCTAAGTCCGGCTGGTCCTTTGCTTGTACCACATTGTGCATCCGAAGACTGCAAAATAGGAGGTTATGATATTCCACGTAATACTATTGTATTGGTCAATGTTTGGGCTATACATAGAGATCCAAATTTATGGGAAGATGCCACCAGTTTTAGGCCTGAAAGACATGCAAATGTGGCTGAATTTGAGTACTCATACAAACTATTACCATTTGGTTTGGGGAGAAGAGCATGCCCTGGCATGGCTATGGCGCAGCGCCTGGTTGGCTTGACTTTGGCATCGTTGGTTCAATGTTTTGAGTGGAAGAGAGCGAGCACGTCGTTGGTTGATATGAGAGAGGGTCAAGGGCTCACAATGCCCAAAGTTGAGCCATTAGTAGCCAAGTGTAGACCGCGCTCGATCATGAAAGCGGTTCTCAGCGAAACAATTGGCTAA 1536 40.89 MDFNILLYILLSLVCLLLGYSFLLKPDRLNLPPTPLFCLPFIGHLHLLKHPVHKTFQNLSQKYGHVFSLKFGSRLVVLVSSPSAVQECFTKNDIILANRPSLNAGKYLAYNNTTMAVSPYGDHWRNLRRISTLEIFSTTRLNSFSRIREDEVKRFLRKLCGNYYMLDDHEFRVVELESMLLDLTFNIVMRMLGGMKFCEEKNNTSSEDEGYSKRFRELVTQIMAHSGSTNPGDFIPLWNWIDPTGFNKRIMKLGRRSDELLQGLVDEIRSQEDEGNTMIHHLLRLQNTDPKYYNDLVIKGLIQDILIAGIDSTAVTLQWALSHLLNNPIALEKATTEMDLLVGQERVVNEVDLSNLSYLRGIISETLRLSPAGPLLVPHCASEDCKIGGYDIPRNTIVLVNVWAIHRDPNLWEDATSFRPERHANVAEFEYSYKLLPFGLGRRACPGMAMAQRLVGLTLASLVQCFEWKRASTSLVDMREGQGLTMPKVEPLVAKCRPRSIMKAVLSETIG 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10698595 10702343 + ClCG02G008300.1 Cla02g00809 266935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00809 511 Pfam Cytochrome P450 32 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 505 - -
Cla02g00809 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 505 - -
Cla02g00809 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cla02g00809 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00809 511 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00804 Cla-Chr2:10537173 Cla02g00809 Cla-Chr2:10698595 0 dispersed
Cla02g00805 Cla-Chr2:10596922 Cla02g00809 Cla-Chr2:10698595 0 dispersed
Cla02g00807 Cla-Chr2:10619239 Cla02g00809 Cla-Chr2:10698595 0 dispersed
Cla02g00809 Cla-Chr2:10698595 Cla06g00143 Cla-Chr6:1626534 0 dispersed
Cla08g01605 Cla-Chr8:28690494 Cla02g00809 Cla-Chr2:10698595 1.35E-162 dispersed
Cla02g00808 Cla-Chr2:10676882 Cla02g00809 Cla-Chr2:10698595 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00809 K13260 - csv:101205626 850.121