Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00812 ATGGAATTGAGAAGAGCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCCAGTTCAGAGGGCAGAAGGAAGACGGTCGAAATGGTTCTTGCCAATTCCGCCAATTGCCACTTCACATCCTCAAAGTTGGATTCAGATATGGGCCAGAAAGCATGCATGAGAGAATTAGCAGAGAAGGAATATGAAGCAGAAGAATTCGTTCCTTGCATTCATAAAAAAAACATGGGTAAAGATGCTATAAGAATTCTTCCAACTGACATGAAACATGACTTATTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCAAGTTCTAGCTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTCAGTGGAGGGTCCGATAGTCGCATGAGACATCTAATTAGGGCATCACAAGATTCATCAGAACCACACCTTGCTGAAGCTCCAGCTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCCTGAAGCAGAATCACCAGCAAGTTCTCCATTCCCGTCTCCCAGTCTTGCTCCAACGCCATCTCCAAGTTATGCCCCAACCAAGTCACCATATCGAAATCTCCGTCCACCTGTTGAGGCTCCAGCTCCGTCTCCAGAACCACTACCAGACGACACTGATGTTTCGGATTTGCCTACACCTTCTGTAGTTCGCTCACCACCTCCTCCACGTGCTTCTCCCAAGTCTCGCCCTCCAAAGAAGCATGAAGAAGACCAAACAGCCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCTCTGCTTTTGTTTTGCTGTCGTAGAGGTGAGAAAAGTAAGGTAGATCCGAAGGATGGGCAAAAGGATGAGAGACCTCTCCTAAACATATCTTTGAGCGAATTATCAGCAGGTAAGATGTCATACAGCCTTGGAAATCCAGCTACCAAAGAGGTAAATGCTGGTAATGGAACTAAACCACCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGATACCTCTATGGCTGAGGGTCCAACATTTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGAACAGATTCTCAACCTCCTCCAGAACCAGCACCAGCACCAGCACCAGCACCAGCAACAGCACCAGCGGCAGCACCAGCACCGCCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCCCTGAAAGTTGGCCGACCCCCACCTGCACCACCGACGGCAATCCCTGGTAAATCTCAAGCAGCGCCTATGGGGCCACATCGACGTGGACCCAGTGGCTCAAGTATGGATGGGGATTCAGGAGCCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTCGCTAACCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAGTTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATACAGCAGTAGCAGCCAACAAAGGCGACCGCAAGAAAGATTTAGCTTTAGACCCTTCAGCACAGTTCATTCAAATCATCGACGCTAAGAAGGCTCAAAACCTTTCAATTCTCCTACGAGCATTGAATGTAACAACAGCAGAAGTTTTGGATGCCCTTGAAGAAGGCACTCTCTCTTTTCTTTTTCTTAATCCAACTTGCTTTTGTGTGATGCTTGAAACTAACAAAGGGGTTCTAACAAATTATGTACCAGGAAATCCTGATCTTCCAGCAGAGCTTCTGCAGACCTTGTTGAAGATGGCACCAACGACAGAAGAGGAACTGAAACTGAGATTATTTTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAGCGATTCCTCAAAGTGTTGGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTTTCAATGTCGGAAGACGTCACTAACATTAAGGAGTCATTCGCTACTCTAGAGGTCGCATGCAACAATCTTAGAAATAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGCGGTGCTCAGGCATTCAAGCTCGATACGCTTTTGAAACTAGCGGATGTTAAAGGAACCGATGGCAAGACTACACTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCATCCGAGCAGCCCGCTCCGACAGACAAAGCCGGAGTTCGTCCAGCGTAATCTCCAGCGATACGATTTTCGAGGACTTCACCGACGATTCGACGGAACATTATCGGCAATTAGGGCTTCAGGTGGTTTCTAGTTTAAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCTGCCATAGATGCGGAGGGGCTAACGACGACGATATCGAAACTTGGCCAGTCTCTGTTTAAAACCAAAGCATTCATAGACGCGGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGTTGTCGAAATTTTTGGAAGGAGCGGAAGCAGATATTTCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCATTGGTGAGGAGCACGGTGGATTACTTCCATGGACATTCTGGAAAGGAGGAAGGATTGAGATTGTTTACGATCGTACGGGACTTCTTGATTGTGTTGGACAAGACATGTAAACAGGTCAAAGAAGCAGCTGAGGCTGCGGCCAAGCAAGCGAAGAATTCCAAAAAAGAAACTGCGACATCGTCGGCTACTTACAAGCAGAATTCAGATCTACGGCAGCGGCTATTTCCGGCAATTGCAGAACGACGGATAGGCGATGATTCAAGTTCTTCGGACGAGGACGACGATGGCGAGAGTTCATCTTCATCATCCTAG 2862 47.03 MELRRAGYVVVFVTLLCALAIASSEGRRKTVEMVLANSANCHFTSSKLDSDMGQKACMRELAEKEYEAEEFVPCIHKKNMGKDAIRILPTDMKHDLLDCLRKKTMLTRGSEPSSSLFDRFSKPIELFFSGGSDSRMRHLIRASQDSSEPHLAEAPAPSPSPSPSPSPSPEAESPASSPFPSPSLAPTPSPSYAPTKSPYRNLRPPVEAPAPSPEPLPDDTDVSDLPTPSVVRSPPPPRASPKSRPPKKHEEDQTAIIAGIVAAGVGVVLVVALLLFCCRRGEKSKVDPKDGQKDERPLLNISLSELSAGKMSYSLGNPATKEVNAGNGTKPPSFVGNLSVNPENDTSMAEGPTFDGKSSAMPPLKPPPGRTDSQPPPEPAPAPAPAPATAPAAAPAPPPPPAPRAPPPPPLKVGRPPPAPPTAIPGKSQAAPMGPHRRGPSGSSMDGDSGAQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVAANKGDRKKDLALDPSAQFIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGTLSFLFLNPTCFCVMLETNKGVLTNYVPGNPDLPAELLQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSVISSDTIFEDFTDDSTEHYRQLGLQVVSSLSTELQDVKRAAAIDAEGLTTTISKLGQSLFKTKAFIDAEMKSLDEDSKFHQSLSKFLEGAEADISWIAVEEKKIMALVRSTVDYFHGHSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNSKKETATSSATYKQNSDLRQRLFPAIAERRIGDDSSSSDEDDDGESSSSSS 953
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10752978 10756380 - ClCG02G008340.1 Cla02g00812 266938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00812 953 Coils Coil 886 906 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 311 353 - -
Cla02g00812 953 Gene3D Formin, FH2 domain 454 922 IPR042201 -
Cla02g00812 953 PANTHER FORMIN-LIKE PROTEIN 3 1 551 - -
Cla02g00812 953 SMART it6_source 446 897 IPR015425 -
Cla02g00812 953 MobiDBLite consensus disorder prediction 311 453 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 939 953 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 142 251 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 902 920 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 898 953 - -
Cla02g00812 953 ProSiteProfiles Formin homology-2 (FH2) domain profile. 446 908 IPR015425 -
Cla02g00812 953 PANTHER FORMIN-LIKE PROTEIN 3 574 942 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 361 425 - -
Cla02g00812 953 PANTHER FORMIN-RELATED 1 551 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla02g00812 953 PANTHER FORMIN-RELATED 574 942 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla02g00812 953 SUPERFAMILY Formin homology 2 domain (FH2 domain) 397 900 - -
Cla02g00812 953 MobiDBLite consensus disorder prediction 154 193 - -
Cla02g00812 953 Pfam Formin Homology 2 Domain 450 881 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g01710 Cla02g00812 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00812 Cla-Chr2:10752978 Cla03g01635 Cla-Chr3:32236458 1.33E-108 dispersed
Cla02g00812 Cla-Chr2:10752978 Cla02g01189 Cla-Chr2:25442545 1.39E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00812 - - cmos:111449007 1023.08