Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00812 | ATGGAATTGAGAAGAGCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCCAGTTCAGAGGGCAGAAGGAAGACGGTCGAAATGGTTCTTGCCAATTCCGCCAATTGCCACTTCACATCCTCAAAGTTGGATTCAGATATGGGCCAGAAAGCATGCATGAGAGAATTAGCAGAGAAGGAATATGAAGCAGAAGAATTCGTTCCTTGCATTCATAAAAAAAACATGGGTAAAGATGCTATAAGAATTCTTCCAACTGACATGAAACATGACTTATTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCAAGTTCTAGCTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTCAGTGGAGGGTCCGATAGTCGCATGAGACATCTAATTAGGGCATCACAAGATTCATCAGAACCACACCTTGCTGAAGCTCCAGCTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCCTGAAGCAGAATCACCAGCAAGTTCTCCATTCCCGTCTCCCAGTCTTGCTCCAACGCCATCTCCAAGTTATGCCCCAACCAAGTCACCATATCGAAATCTCCGTCCACCTGTTGAGGCTCCAGCTCCGTCTCCAGAACCACTACCAGACGACACTGATGTTTCGGATTTGCCTACACCTTCTGTAGTTCGCTCACCACCTCCTCCACGTGCTTCTCCCAAGTCTCGCCCTCCAAAGAAGCATGAAGAAGACCAAACAGCCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCTCTGCTTTTGTTTTGCTGTCGTAGAGGTGAGAAAAGTAAGGTAGATCCGAAGGATGGGCAAAAGGATGAGAGACCTCTCCTAAACATATCTTTGAGCGAATTATCAGCAGGTAAGATGTCATACAGCCTTGGAAATCCAGCTACCAAAGAGGTAAATGCTGGTAATGGAACTAAACCACCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGATACCTCTATGGCTGAGGGTCCAACATTTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGAACAGATTCTCAACCTCCTCCAGAACCAGCACCAGCACCAGCACCAGCACCAGCAACAGCACCAGCGGCAGCACCAGCACCGCCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCCCTGAAAGTTGGCCGACCCCCACCTGCACCACCGACGGCAATCCCTGGTAAATCTCAAGCAGCGCCTATGGGGCCACATCGACGTGGACCCAGTGGCTCAAGTATGGATGGGGATTCAGGAGCCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTCGCTAACCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAGTTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATACAGCAGTAGCAGCCAACAAAGGCGACCGCAAGAAAGATTTAGCTTTAGACCCTTCAGCACAGTTCATTCAAATCATCGACGCTAAGAAGGCTCAAAACCTTTCAATTCTCCTACGAGCATTGAATGTAACAACAGCAGAAGTTTTGGATGCCCTTGAAGAAGGCACTCTCTCTTTTCTTTTTCTTAATCCAACTTGCTTTTGTGTGATGCTTGAAACTAACAAAGGGGTTCTAACAAATTATGTACCAGGAAATCCTGATCTTCCAGCAGAGCTTCTGCAGACCTTGTTGAAGATGGCACCAACGACAGAAGAGGAACTGAAACTGAGATTATTTTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAGCGATTCCTCAAAGTGTTGGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTTTCAATGTCGGAAGACGTCACTAACATTAAGGAGTCATTCGCTACTCTAGAGGTCGCATGCAACAATCTTAGAAATAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGCGGTGCTCAGGCATTCAAGCTCGATACGCTTTTGAAACTAGCGGATGTTAAAGGAACCGATGGCAAGACTACACTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCATCCGAGCAGCCCGCTCCGACAGACAAAGCCGGAGTTCGTCCAGCGTAATCTCCAGCGATACGATTTTCGAGGACTTCACCGACGATTCGACGGAACATTATCGGCAATTAGGGCTTCAGGTGGTTTCTAGTTTAAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCTGCCATAGATGCGGAGGGGCTAACGACGACGATATCGAAACTTGGCCAGTCTCTGTTTAAAACCAAAGCATTCATAGACGCGGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGTTGTCGAAATTTTTGGAAGGAGCGGAAGCAGATATTTCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCATTGGTGAGGAGCACGGTGGATTACTTCCATGGACATTCTGGAAAGGAGGAAGGATTGAGATTGTTTACGATCGTACGGGACTTCTTGATTGTGTTGGACAAGACATGTAAACAGGTCAAAGAAGCAGCTGAGGCTGCGGCCAAGCAAGCGAAGAATTCCAAAAAAGAAACTGCGACATCGTCGGCTACTTACAAGCAGAATTCAGATCTACGGCAGCGGCTATTTCCGGCAATTGCAGAACGACGGATAGGCGATGATTCAAGTTCTTCGGACGAGGACGACGATGGCGAGAGTTCATCTTCATCATCCTAG | 2862 | 47.03 | MELRRAGYVVVFVTLLCALAIASSEGRRKTVEMVLANSANCHFTSSKLDSDMGQKACMRELAEKEYEAEEFVPCIHKKNMGKDAIRILPTDMKHDLLDCLRKKTMLTRGSEPSSSLFDRFSKPIELFFSGGSDSRMRHLIRASQDSSEPHLAEAPAPSPSPSPSPSPSPEAESPASSPFPSPSLAPTPSPSYAPTKSPYRNLRPPVEAPAPSPEPLPDDTDVSDLPTPSVVRSPPPPRASPKSRPPKKHEEDQTAIIAGIVAAGVGVVLVVALLLFCCRRGEKSKVDPKDGQKDERPLLNISLSELSAGKMSYSLGNPATKEVNAGNGTKPPSFVGNLSVNPENDTSMAEGPTFDGKSSAMPPLKPPPGRTDSQPPPEPAPAPAPAPATAPAAAPAPPPPPAPRAPPPPPLKVGRPPPAPPTAIPGKSQAAPMGPHRRGPSGSSMDGDSGAQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVAANKGDRKKDLALDPSAQFIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGTLSFLFLNPTCFCVMLETNKGVLTNYVPGNPDLPAELLQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSVISSDTIFEDFTDDSTEHYRQLGLQVVSSLSTELQDVKRAAAIDAEGLTTTISKLGQSLFKTKAFIDAEMKSLDEDSKFHQSLSKFLEGAEADISWIAVEEKKIMALVRSTVDYFHGHSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNSKKETATSSATYKQNSDLRQRLFPAIAERRIGDDSSSSDEDDDGESSSSSS | 953 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10752978 | 10756380 | - | ClCG02G008340.1 | Cla02g00812 | 266938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00812 | 953 | Coils | Coil | 886 | 906 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 311 | 353 | - | - | |
Cla02g00812 | 953 | Gene3D | Formin, FH2 domain | 454 | 922 | IPR042201 | - | |
Cla02g00812 | 953 | PANTHER | FORMIN-LIKE PROTEIN 3 | 1 | 551 | - | - | |
Cla02g00812 | 953 | SMART | it6_source | 446 | 897 | IPR015425 | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 311 | 453 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 939 | 953 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 142 | 251 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 902 | 920 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 898 | 953 | - | - | |
Cla02g00812 | 953 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 446 | 908 | IPR015425 | - | |
Cla02g00812 | 953 | PANTHER | FORMIN-LIKE PROTEIN 3 | 574 | 942 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 361 | 425 | - | - | |
Cla02g00812 | 953 | PANTHER | FORMIN-RELATED | 1 | 551 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cla02g00812 | 953 | PANTHER | FORMIN-RELATED | 574 | 942 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cla02g00812 | 953 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 397 | 900 | - | - | |
Cla02g00812 | 953 | MobiDBLite | consensus disorder prediction | 154 | 193 | - | - | |
Cla02g00812 | 953 | Pfam | Formin Homology 2 Domain | 450 | 881 | IPR015425 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01710 | Cla02g00812 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00812 | Cla-Chr2:10752978 | Cla03g01635 | Cla-Chr3:32236458 | 1.33E-108 | dispersed | |
Cla02g00812 | Cla-Chr2:10752978 | Cla02g01189 | Cla-Chr2:25442545 | 1.39E-20 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00812 | - | - | cmos:111449007 | 1023.08 |