Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00824 ATGAGAATGGGGAGGCTTACTTCTTTGGTGTTGGCCACTATAGTTGGTCTTCTAGCCCTGATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTGGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCAGCAACTTTCATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGATGGATCTGTGCTTATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCAACCAAATCAAACACTCAGAGGTTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCATTGTAGCCACAGCTATTTTTACTCGTTTTTCTTGTCGAAAGATGAAAAAGACAAGCAACCCATTTTCTCTGTTTGATGGTTGTGCTCATTGCAATGTGCAGGGAGGTCCATACTGGGAAGTTCCAACTGGCCGAAGGGATGGAGTAATCTCAAGATCATCAGAAGCCTTGAATAACATTCCTCCTCCATTTGGGAACTTTTCCACACTTCAAAGGCTTTTCGCGAACCAAGGCCTTGATCTAAAAGACTTGGTGTTACTATCTGGCGCTCACACAATCGGTATCGCACACTGCTCATCATTCAGAAACCGACTCTACAATTTCACCGGCGTCGGAGACCAAGATCCCTCTCTGGACCCAAGATACGCCGCTAATCTGAAGGCCAACAAATGCAAAACTCCGACCGACAACAGCAAAGTGGAAATGGACCCTGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTCACTACAGACGCAACTACATTGGGTTTAGTTCAGAAACTGGTACAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAGACTGGAACTGAAGGTGAAATCAGAAGGAGATGCGCTGTGGTGAATAGTTGA 1077 45.4 MRMGRLTSLVLATIVGLLALIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINSTSNNQAEKDSQPNQTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVARDTIVATAIFTRFSCRKMKKTSNPFSLFDGCAHCNVQGGPYWEVPTGRRDGVISRSSEALNNIPPPFGNFSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVQGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCAVVNS 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10994851 10996417 - ClCG02G008470.1 Cla02g00824 266950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00824 358 PANTHER PEROXIDASE 14 137 - -
Cla02g00824 358 Gene3D Peroxidase, domain 2 194 336 - -
Cla02g00824 358 ProSitePatterns Peroxidases proximal heme-ligand signature. 216 226 IPR019793 -
Cla02g00824 358 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cla02g00824 358 PANTHER PEROXIDASE 25-RELATED 166 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 168 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 274 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 215 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 290 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Plant peroxidase signature 331 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PRINTS Haem peroxidase superfamily signature 276 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 Pfam Peroxidase 46 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 Gene3D - 31 357 - -
Cla02g00824 358 ProSiteProfiles Plant heme peroxidase family profile. 27 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PANTHER PEROXIDASE 166 357 - -
Cla02g00824 358 CDD secretory_peroxidase 27 356 IPR033905 GO:0004601|GO:0042744
Cla02g00824 358 SUPERFAMILY Heme-dependent peroxidases 27 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g00824 358 PANTHER PEROXIDASE 25-RELATED 14 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00824 Cla-Chr2:10994851 Cla06g00516 Cla-Chr6:6238791 1.84E-107 dispersed
Cla09g01455 Cla-Chr9:27773951 Cla02g00824 Cla-Chr2:10994851 7.85E-68 transposed
Cla02g00173 Cla-Chr2:1780905 Cla02g00824 Cla-Chr2:10994851 5.29E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00824 K00430 - csv:101213629 596.66