Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00919 ATGCAAGCTTCTCAGCTTCATAGAGGTTCACATATGTCAAAGAGATTATGTTATCAGCCCCTTCAAGAAGTGGATGCCTACTGCTTCTCCCAATTTCAATCTTTAGGTCGCCACTTATATTCCAGTGCCGGCAACCAAAGAGCTCAGTTCAATGTTCAAGACATCGGTGATCGATACTGCACTCTGGAGTCGTCCTCGGGAAGCCACGGCTATGCAGCTCACAACTCAACGTCGACTGTCACTTTCTCACCCAATGGGAGTCCAGTATCGCAACAGGATTCTCGCTCAAATCCTTCTGATCAGCATAATTCCCCTGATAATACATATGGTTCTTCAGTAAGTGGATCCAGCATAACCAATGATATTAGTGATTTTAGGCACAAACTACTGGAATTGGAAACTGTGATGCTTGGTCCTGATTCTGATGTTAGTGATAGTTTTGATAGTATCTACACGGAGGGAACAGACAATCCAGAGATGGGAACTTGGGGACAAGCGGTGGATGCTATTACTAAAAGAAACTTAAAAAAGATCTTGATAGCTTGTGCTAAAGCTGTATCAGATAGTGATGCGTTGATGGCACAATGGCTTATGGATGAGTTGCGAAAGATGGTGTCGGTTTGCGGTGAACCGATGCAGAGGTTGGGAGCGTATATGCTGGAGGGGCTGGTTGCACGGTTAGCCTCCTCGGGCAGTTGCATCTATAAATCTTTGAGATGCAAGGAACCAGCAAGAGCGGAGCTCCTCTCATATATGCACCTTCTTTATGAGGGTACTCAGTGGATCACTTTGATTCAAGCTTTTGCAGGCAGGCCTGGTGGGCCACCTCACATTCGTATAACCGGTATAGATGATCCTGCATCAGCTTATGCTCGTGGAGGCGGGCTAGATATCGTTGGGAAGAGACTTTCCAAGTTAGCGAAGTTATTTAACGTGCCATTTGAGTTTCACTCTGCTGCCATTTCTGGCTGTGATGTTCAGCAAAATAATCTGGGCATTCGACGAGGGGAGGCTTTAGCAGTGAATTTTGCATTCATGCTACACCATATGCCGGATGAAAGCGTAAGCACCGAAAATCATCGAGATAGGCTATTGAGGCTGGTTAAGGGTCTGTCTCCAAAGGTCGTGACACTTGTTGAACAAGAATCCAACACAAACACCGCTGCATTCTATCCCCGGTTCATCGAGACACTGGATTACTACAATGCCATGTTTGAATCAATTGACGTTACTCTTCCAAGACAGCACAAGGAGCGAATTAACATCGAGCAGCATTGTCTAGCCAGGGAAGTTGTCAACATACTAGCATGTGAAGGGGCTGAGAGAGTGGAACGACACGAGCTACTCGGAAAGTGGAGACTGCGATTTGCAATGGCAGGATTTACCCCTTACCCATTAAGCTCTTTGGTGAATGCTACCATCAAAACGTTATTAGATAACTATTCTAACAGCATCACCACCAAGATGCCAGCTGAAAACTCAATTCCATTTGATCGAGACGCAGAGCCTTTTGTTGAGGTTGATCCAACTGGAAGGTTTGGACGATACGACGATCTTCTTGGGTCTGGAGCGGTAAAGAGAGTTTATCGGGCATTCGATCAGGAGGAAGGAATAGAGGTTGCTTGGAATCAGGTTCGATTGAGAAATTTTAGTGGGGATCCAGTGTTCATCAACCGCTTGAGGTCTGAGGTTCAGCTGCTGAGTACTTTAAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGACGACGAGCGTAATACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGAGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAAAAATGGTCAAAGCAAGTACTCGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGACCTCAACTGCAGTAACATATTTGTCAATGGGAACATTGGCCAGGTTAAAATAGGCGATCTAGGGTTTGCAGCTATAGTCGGCAGGAGTCATGCTGCACATTCAATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAGGAAGACTACACAGAGATGGTGGATATATACTCCTTTGCGATGTGTTTGCTTGAGATGGTTACGATGGAGATACCATACAGTGAATGTGATAGTGTTGCCAAGATATACAAGAAGGTCACAACTGGAATAAAGCCCCAAGCAATATCAAAAGTGACTGATGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAGCCAAGGGCAAGACCTTCCGCTTCTGAACTTCTCAAAGATCCATTCTTTGACGAAGTGAGGGATGAAGATTCTGAACAGAGTTATTAA 2355 44.59 MQASQLHRGSHMSKRLCYQPLQEVDAYCFSQFQSLGRHLYSSAGNQRAQFNVQDIGDRYCTLESSSGSHGYAAHNSTSTVTFSPNGSPVSQQDSRSNPSDQHNSPDNTYGSSVSGSSITNDISDFRHKLLELETVMLGPDSDVSDSFDSIYTEGTDNPEMGTWGQAVDAITKRNLKKILIACAKAVSDSDALMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLRCKEPARAELLSYMHLLYEGTQWITLIQAFAGRPGGPPHIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPFEFHSAAISGCDVQQNNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFYPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSNSITTKMPAENSIPFDRDAEPFVEVDPTGRFGRYDDLLGSGAVKRVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQAISKVTDDEVRAFIEKCIAQPRARPSASELLKDPFFDEVRDEDSEQSY 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14042250 14049960 + ClCG02G009400.2 Cla02g00919 267045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00919 784 Pfam Protein kinase domain 518 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00919 784 Gene3D Phosphorylase Kinase; domain 1 499 595 - -
Cla02g00919 784 Pfam GRAS domain family 257 483 IPR005202 -
Cla02g00919 784 MobiDBLite consensus disorder prediction 66 115 - -
Cla02g00919 784 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 258 484 IPR005202 -
Cla02g00919 784 SUPERFAMILY Protein kinase-like (PK-like) 507 773 IPR011009 -
Cla02g00919 784 ProSiteProfiles GRAS family profile. 166 511 IPR005202 -
Cla02g00919 784 Gene3D Transferase(Phosphotransferase) domain 1 597 778 - -
Cla02g00919 784 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 257 IPR005202 -
Cla02g00919 784 ProSiteProfiles Protein kinase domain profile. 514 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g00919 784 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 18 257 - -
Cla02g00919 784 CDD STKc_WNK 512 772 - -
Cla02g00919 784 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 258 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00919 Cla-Chr2:14042250 Cla10g00432 Cla-Chr10:5807527 0 dispersed
Cla05g01549 Cla-Chr5:25965162 Cla02g00919 Cla-Chr2:14042250 2.42E-61 dispersed
Cla02g00919 Cla-Chr2:14042250 Cla06g00582 Cla-Chr6:7111152 1.41E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60634 PF00069 Pkinase 5.90E-49 CL0016 Cla TF
80340 PF00069 Pkinase 5.90E-49 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00919 K08867 - csv:101221914 908.672