Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01035 ATGGATGGATTTAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGCGCCGAGATGGGGTCGTTAGGCGAGAAAACCATACTGGAATTTGAAGATGAGAGCCTTGTTAGTCCTGTATCATTAAATAGAAAGAACTTTTCTATTGAGGGATCTATCCATAGTTCTACGTTGGGTGGTGGTTCGCAGAAACTTAGTTACAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCTGCTAAAATAAACCTTCTCATGCCTTTTGGGCCTTTAGCAATAATAGTCAGCACGTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGATATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCTACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATCCGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGAGAGCAGGTCTTCAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCGACACACACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTTGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTTGACGAGGGGGATAATGAAGGGAGTTCTTCTGATGATGAAGAAGCTCCTGAGATTACCATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATCTCCGTCCTCTCTGAATACTTGGTTAATGCAATCGAGGGGGCATCGGTTGCAATGAACATACCAGTAGCATTCATTAGTGTTATCCTACTACCTATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCGACACAGATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAGCTTTTTGAAACCGCCACGCTTTTCATCACGGTCATTGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTAATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGACCCAGCATCAGTTGGTAAGCTTTCACTCCCTTTGCTACAACTGGGAAACTGCAAACAAAATGGAAGCTATTCAATGCCCTACAAAACTAACAGTCTAACCATGAAAATCAAAACTTTTACACAGGAGACAAGACCCGAAAACCTGGTGTATGAAAGGCAAGGGACGACTCAAAGAAGTGAATCTGCCTGCACTAGTACTCTCTTGAAGATGGGATTGACCGAAGCTCGAGGTTCACTCCATTGCTGTATAGTTCTGAATTCAGGCTACAACCTTGTTCAGAAATCATTTTTCCATGTTTTGGGACAACCAATGGCAATAGATGTTTCCTTGATTCTTCCAGTCGTTGGTGCTGATCTTGTTTTATCATTGCAAGCTTTGGCAAATACTCACAACTTAGCAACTAGGAATGCTAGATATTGA 1755 42.05 MDGFRSNDNKQGVERHSRAEMGSLGEKTILEFEDESLVSPVSLNRKNFSIEGSIHSSTLGGGSQKLSYSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEGDNEGSSSDDEEAPEITMWESIIWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLLQLGNCKQNGSYSMPYKTNSLTMKIKTFTQETRPENLVYERQGTTQRSESACTSTLLKMGLTEARGSLHCCIVLNSGYNLVQKSFFHVLGQPMAIDVSLILPVVGADLVLSLQALANTHNLATRNARY 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20991062 20996735 + ClCG02G010570.2 Cla02g01035 267161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01035 584 Gene3D - 283 442 IPR044880 -
Cla02g01035 584 Gene3D - 138 278 IPR044880 -
Cla02g01035 584 TIGRFAM cax: calcium/proton exchanger 92 441 IPR004798 GO:0006816|GO:0015369
Cla02g01035 584 Pfam Sodium/calcium exchanger protein 110 265 IPR004837 GO:0016021|GO:0055085
Cla02g01035 584 Pfam Sodium/calcium exchanger protein 299 438 IPR004837 GO:0016021|GO:0055085
Cla02g01035 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 452 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cla02g01035 584 PANTHER VACUOLAR CATION/PROTON EXCHANGER 14 452 - -
Cla02g01035 584 TIGRFAM caca2: calcium/proton exchanger 78 441 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01035 Cla-Chr2:20991062 Cla10g00392 Cla-Chr10:5330239 0 dispersed
Cla02g01035 Cla-Chr2:20991062 Cla10g02088 Cla-Chr10:36577096 5.36E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01035 K07300 - csv:101215915 835.484