Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01047 ATGGAGGAGAAGCGAGGTACGAGCAGCAACAAGCCTACCGACAAATGGATGGCATTTGACAGAGAACCAAACACAACAAACTCTCCTGGAAATGAATCAAAAGAAGACAGAAAAAGCTGGCAATCTTCTTCCAAACGGGCAATATCTACAGAAGCAAACATAGCAGAAAGGGCGGCGGAGTGGGGACTGGTGGTGGAGACAAACGTGGAAGAAGGGAGTTTCAAGGCCATCGTGGGGAGAGCATCAGGTGAAGGAGGGGGCAGCAAAAGATCATCAGAGAAAATCAGTGGCACAGGAAGAACTTCAAGCTTTGGCAAGGAAACCTCTGGAGTTTTCCCAAGGGTATCACAAGAGTTGAAGGACGCTCTGGCTTCTTTAGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGACTGCCCCATCATGTATGCGAGCAGTGGCTTCTTTGGCATGACTGGTTATGCTTCAGAGGAAGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATCCGATATGCAGTGAAAAACGGCAAAAGCTACTGTGGGAGGCTTTTGAACTACAAGAAGAATGGCACTCCTTTCTGGAATCTTCTGACAGTCACACCCATCAAGGATGACAATGGCAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAATACACAGAAGGCATAAATGATAAAGCATTACGACCGAATGGGTTGCCAAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAATGGATTCCATCACAGAGGTCGTTCAGACTGTGAAGAATCCTCGATCTCATAATCGAGCTATGAGTCATGACACTACCAGAAAAAAAGAAGATTTGGAAAAGTTCAATCTTGACTATGTTCTTCCAAAGTCGGTTGAAGCTGCAAATGATACACCGGGTAGACAAACTCCTCAACAGGACCTCAAAGATGATGGGTTAGGCAAGAAACCTAGGTTATCAAGTCGAGTTTCTCTAATGGGTTTCAAAGGGAAATCTCTAAGCAGTTCAAGGAAGCTTGAAGTAACAGCCTTTGAACCAGAAATTTTGATGTCCGACGAAGTAGAACGGACTGATAGTTGGGACCGTGCTGAAAGAGAAAAGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAGAGAATTGAGAAAAATTTTGTCATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCATCCGACAGCTTTCTTGAATTGACGGAATATACTCGTGAGGAAATTTTGGGACGAAACTGTAGGTTTCTTCAAGGACCTGAAACAGATCAAGAAACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACTGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCAATGCGTGATGAAACGATATTTGCATCCGACAGCTTTCTTGAATTGACGGAATATACTCGTGAGGAAATTTTGGGACGAAACTGTAGGTTTCTTCAAGGACCTGAAACAGATCAAGAAACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACTGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCAATGCGTGATGAAACGGGAGAGCTTCAATATTTTATTGGTGTACAACTAGATGGAAGTGGTCACGTGGAACCTTTGCAAAACCGCCTTTCTGAGAACGCAGAGCTGCAAAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTTCGTGAACTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCACTTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCACAATTCTTCTTGGAGTGCTATACAGAAGATTATCCGACGTGGTGAAAAAATTGGACTCCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTTCAAGCGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTTTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACACTCTACACTTCATTTGAGACCCCTACACACGTTTGTTTGATAACAGACTTCTGCCCTGGTGGGGAGTTATTCGCATTGCTTGATAAGCAACCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTACCGGGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGGCATGTTACGCTTGCTGACTTCGATTTATCACTTGTAACATCCTGCAAACCGCAGATTGTGAAGTATCCATTGCATCATGGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTTGCAGAGCCGATCACGCAATCAAATTCTTTTGTTGGAACCGAAGAGTATATTGCTCCTGAAATTATAACAGGGGAAGGCCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATATTGTTATATGAGATGCTTTATGGTCGCACGCCTTTCAGAGGAAAGAACAGGCAGAAGACTTTTGGTAACATCTTGCACAAAGATCTCACTTTCCCGAGTAGCATTCAGGTGAGTCTTGCAGCAAGGCAGCTAATCAATGCATTGCTACAAAGAGACCCCGCCAGACGTTTAGGATCAAGTACAGGTGCAAATGAAATCAAACAGCACCCCTTTTTCCAATCAATCAACTGGCCATTGATCCGGTGTATGGTCCCGCCACCATTAGAATCACCTCTTCACCTAACTGGAAAAGATGGAACAACCAAGAACATAAACTGGGAAGATGATGGTGTGCTTAGCTCAATGGATATGGATTTCTTCTGA 2970 43.2 MEEKRGTSSNKPTDKWMAFDREPNTTNSPGNESKEDRKSWQSSSKRAISTEANIAERAAEWGLVVETNVEEGSFKAIVGRASGEGGGSKRSSEKISGTGRTSSFGKETSGVFPRVSQELKDALASLEQTFVVSDATKPDCPIMYASSGFFGMTGYASEEGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNGNTIKFIGMQVEVSKYTEGINDKALRPNGLPKSLIRYDARQKEKAMDSITEVVQTVKNPRSHNRAMSHDTTRKKEDLEKFNLDYVLPKSVEAANDTPGRQTPQQDLKDDGLGKKPRLSSRVSLMGFKGKSLSSSRKLEVTAFEPEILMSDEVERTDSWDRAEREKDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGHVEPLQNRLSENAELQSAKLVKATAENVDEAVRELPDANLRPEDLWALHSQPVFPRPHKKHNSSWSAIQKIIRRGEKIGLQHFKPIKPLGCGDTGSVHLVELLGSSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCPGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLVTSCKPQIVKYPLHHGRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPARRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLHLTGKDGTTKNINWEDDGVLSSMDMDFF 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21465560 21483046 - ClCG02G010700.1 Cla02g01047 267173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01047 989 CDD PAS 142 221 IPR000014 -
Cla02g01047 989 CDD PAS 481 568 IPR000014 -
Cla02g01047 989 MobiDBLite consensus disorder prediction 1 47 - -
Cla02g01047 989 MobiDBLite consensus disorder prediction 79 109 - -
Cla02g01047 989 ProSiteProfiles PAC domain profile. 179 233 IPR000700 -
Cla02g01047 989 MobiDBLite consensus disorder prediction 89 109 - -
Cla02g01047 989 ProSitePatterns Protein kinases ATP-binding region signature. 660 683 IPR017441 GO:0005524
Cla02g01047 989 Pfam PAS domain 136 222 IPR000014 -
Cla02g01047 989 Pfam PAS domain 400 479 IPR000014 -
Cla02g01047 989 Pfam PAS domain 480 568 IPR000014 -
Cla02g01047 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 393 479 IPR035965 -
Cla02g01047 989 ProSiteProfiles PAS repeat profile. 481 526 IPR000014 -
Cla02g01047 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 135 222 IPR035965 -
Cla02g01047 989 CDD PAS 392 479 IPR000014 -
Cla02g01047 989 TIGRFAM sensory_box: PAS domain S-box protein 481 568 IPR000014 -
Cla02g01047 989 TIGRFAM sensory_box: PAS domain S-box protein 402 478 IPR000014 -
Cla02g01047 989 ProSiteProfiles PAS repeat profile. 377 450 IPR000014 -
Cla02g01047 989 PANTHER FLIPPASE KINASE 1-RELATED 88 479 - -
Cla02g01047 989 PANTHER FLIPPASE KINASE 1-RELATED 481 513 - -
Cla02g01047 989 PANTHER FLIPPASE KINASE 1-RELATED 509 987 - -
Cla02g01047 989 SMART pac_2 182 224 IPR001610 -
Cla02g01047 989 SMART pac_2 454 493 IPR001610 -
Cla02g01047 989 SMART pac_2 530 572 IPR001610 -
Cla02g01047 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Cla02g01047 989 MobiDBLite consensus disorder prediction 1 18 - -
Cla02g01047 989 Gene3D PAS domain 366 480 - -
Cla02g01047 989 Gene3D PAS domain 481 606 - -
Cla02g01047 989 Gene3D Transferase(Phosphotransferase) domain 1 738 957 - -
Cla02g01047 989 SMART serkin_6 654 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01047 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 481 568 IPR035965 -
Cla02g01047 989 PANTHER BNAA02G07840D PROTEIN 481 513 - -
Cla02g01047 989 PANTHER BNAA02G07840D PROTEIN 88 479 - -
Cla02g01047 989 CDD STKc_phototropin_like 652 960 - -
Cla02g01047 989 MobiDBLite consensus disorder prediction 298 324 - -
Cla02g01047 989 Pfam Protein kinase domain 656 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01047 989 Gene3D PAS domain 129 289 - -
Cla02g01047 989 PANTHER BNAA02G07840D PROTEIN 509 987 - -
Cla02g01047 989 ProSiteProfiles Protein kinase domain profile. 654 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01047 989 SUPERFAMILY Protein kinase-like (PK-like) 631 966 IPR011009 -
Cla02g01047 989 Gene3D Phosphorylase Kinase; domain 1 653 737 - -
Cla02g01047 989 ProSiteProfiles PAC domain profile. 527 581 IPR000700 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g00317 Cla02g01047 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01047 Cla-Chr2:21465560 Cla10g01319 Cla-Chr10:28103576 6.18E-114 dispersed
Cla02g02020 Cla-Chr2:35196819 Cla02g01047 Cla-Chr2:21465560 8.16E-19 transposed
Cla05g02191 Cla-Chr5:33542257 Cla02g01047 Cla-Chr2:21465560 4.87E-53 transposed
Cla02g00317 Cla-Chr2:3073844 Cla02g01047 Cla-Chr2:21465560 1.86E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80341 PF00069 Pkinase 2.40E-61 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01047 K20715 - jre:108997379 1253.43