Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01105 ATGGTGTTGTCTCTAATGGAAAACAAGAAGATGAAGATTAATCTATTTATCTCCAATTTATGCTTATGCTTTTTGCTTTTATTATGGTCCGCTAGAGGGAATCTCATCAATTTATTAAGTGACAGTCATGGAGATTCTATTGTTTCGGATGAAGGAAGGTTCGAACTTGGTTTTTTCAGTCCTCATGGAAGCTCAGACTCTAGAAGATATGTCGGAATATGGTACCACGACACAAAACCGGAGGTGGTTGTATGGGTTGCCAATAGGAACCAACCACTATACAACAACAATGGAGCTTTCGCTATCAAAAATGGCAAACTCATGGTATTGGCATCAAACGGCACTGATTTATGGTCCACCAAGCTCCAATTCCCTTCTGATAACATGACAATGGAGCTGATGGCTTCTGGGAATTTAGTCATCAAGCAATCAGGTGTCAAAGGTATCATTATGTGGCAAAGCTTCCACAATCCAACCGACACATTTCTTCCAGGGATGAACATAGTTGATGACTGGAAACTGACTTCTTGGAAAGCTTCAGATGACCCATCGTCTGGGAATTTCAAGTTTCTCAAAGATACAGGAGGTCGCTACATCATTGAGAGACTAAGTGCTCAGTATTGGGTTAGCAAGGAATTCTGGCAAAATTACTCAACTGACACTAATGGAAAGATTGATGAAGTTATAGACTTATTGTCAACGATTAGTGTCGCTAGCTTGAAGGCCAACAACTTCACCGTTAATTTCCAAAATCAAGAACTGGATTACAACTATACAAGGATGGTCATGAGTTCCACCGGGAGAATTCAGTATCTTGCAAGAAACAGAGCGAATCGAAAATGGAATGTCATCTGGTCGGAACCGGAAAACATATGTGGTGCAGTGTCAACTTGTGGGACCTTTGCTACCTGTCGAAGTGACACTAAACACACTTGCAGATGCTTGCCTGGGTTTGAACCTAAGTTGAAGGAAGAATGGGATTCTGGTGATTACTCAAATGGGTGCCAGAGAAAATCAGAAATTTGCATCAAAGAAGAGGTTGAAGCTCGAGATTTCTTGACAATAAATATGAAGGTGAGAAAGACATCCAATATTGTCAAAATCAATGGTGTTGAGGAATGTCAAATCAAGTGCCTTGAATCTTGTACATGTAAAGCATATGTAGTAATTAGTACTATTAGATCTGATCCTGTGTGCGGTATTTGGGAAGATGACCTCCAAAGCATTTGGGAATATACCGATGGTGGTGCTAATGTTAACGTCCGTGTCAAACGTTTTGACATAGAATTGACACAACTCGATTGTAAAACATGTGGAAGCAACATTGTCCCTTATCCTCTAAGTTTGAGCACAGAATCCGACTGTGGTGATCCGCTATATCGTAAATTCAGTTGCAACTTTTCCACTGGTCAGATCATCTTTCATACGGCAGATGTTTACTACAATGTCACCAACATCAATCCACAACTAAAAACTTTTACCATTGCAACAAATGGGTCTATCTGCAGAGGTAATGATGCAAATGCAATTCAAAAGCTTCTGAAATTGGAACACTCGTCTACATTCAAAGTAAGCAGCAACTGTAACTCTGAATTCAATGAAATTGATATTCAATGGGAGAAACCATTAGAGCCAATCTGCAGTTCACCAAGAGATTGCACCAATTGGCCTAATTCATTATGCAACTCATCAACAGACGGAACAAAGAGGTGCTTGTGTCATTCTTCTTTTAAATGGATTGGTACCGGCTGCCAAATTCTTCCAGAGGATGGTTTGAATAAGCCACATCCAAGGCAGAGAAATATCAGAATTAGTATCATTGTCGTAGTGATCATGGCTGGGTTGATTGTTATTTCTTGCTTGGTGTCGTATATTTACTACAAAAGAAGGAAGGTACAACATAAAAAAGAGCAAAGAACAAGTTTTTGGGGAAACCAGGAAACGACTCACTTATATGAAAGTGAGAAACGTATTAGAGACTTTATGGGTTCCGGAATGTTTGGAGAAGATGATAGAAAAGCCATAGAAGTACCAGTTTTTGATTTGGAAACCATACTTATTGCCACAGACAACTTCTCGGAAGCAAACAAAATTGGACGAGGAGGATTTGGGACAGTGTACAAGGGACGTTTCTCGGGAGGACTGGAAATTGCAATAAAGAGGCTGTCGCAAGGTTCAGCCCAAGGCGTAAATGAGTTTAAGAATGAAGCAATTCTGATCGCCAAACTTCAGCATCGAAATCTAGTTAGACTTTTGGGCTATTGTGTTGCAGGAGAAGAGAAAATGTTGGTCTATGAATATATGCCCAACAAAAGCTTAGACTTTTTTATGTTTGGCAAGCCTCTCACCTCTACCCTACCTTGGTTACATTTTTATCTTGATATACCAAAAGAAATATCCAAACCGTTCCTTCGTTTTTTGCTAGATCAAACACAAAGGTTACTGTTGAATTGGGAGATGCGTTTTAATATCATCATCGGCATTGCTCGAGGGCTAGTTTATCTCCATGAAGATTCAAGGTTGAAGATTATTCATAGAGATATGAAAACAAGCAATGTTTTGTTGGACGCAGAAATGAACCCTAAAATTTCCGACTTTGGTTTAGCAAGAATCATTGATGGCAAGCAAACAGAGGCAATCACCAACAGAGTTGTTGGAACTTACGGATACATGTCACCTGAATATGCATTGGATGGATCATTCTCGGTGAAATCTGACGTGTTTAGTTACGGTATAGTCGTGTTGGAGATTATTAGTGGAAGAAGGAACACTGGGTTCTACCAATCTAAGGAAGCATTAAACCTTGTTGGATATGTATGGAATTTGTGGAGAGAGAAAAAGGCAATGGAAATAGCAGAGGTGGGCATACGAAAAAGCTGCAATCCAAATGAAGTTGTAAAATGTGTGGGTGTGGGATTGCTTTGTGTGCAGGAAGACCCCAACGATCGTCCCACAATGTCAAATGTAGCTTTTATGTTAAGCTCTGGCAATGACCTTGCTTCGCTTCCAGATCCTAAACAACCAGCTTTCGTTGATAAAAGATTAACTCCTACTTCTTCTGCAACTTCTTCTTTAGGCTTGAAGCAAGAAATTGTAAGCAATGATTATAGCTTACTTGAGCCTCGTTAA 3129 39.79 MVLSLMENKKMKINLFISNLCLCFLLLLWSARGNLINLLSDSHGDSIVSDEGRFELGFFSPHGSSDSRRYVGIWYHDTKPEVVVWVANRNQPLYNNNGAFAIKNGKLMVLASNGTDLWSTKLQFPSDNMTMELMASGNLVIKQSGVKGIIMWQSFHNPTDTFLPGMNIVDDWKLTSWKASDDPSSGNFKFLKDTGGRYIIERLSAQYWVSKEFWQNYSTDTNGKIDEVIDLLSTISVASLKANNFTVNFQNQELDYNYTRMVMSSTGRIQYLARNRANRKWNVIWSEPENICGAVSTCGTFATCRSDTKHTCRCLPGFEPKLKEEWDSGDYSNGCQRKSEICIKEEVEARDFLTINMKVRKTSNIVKINGVEECQIKCLESCTCKAYVVISTIRSDPVCGIWEDDLQSIWEYTDGGANVNVRVKRFDIELTQLDCKTCGSNIVPYPLSLSTESDCGDPLYRKFSCNFSTGQIIFHTADVYYNVTNINPQLKTFTIATNGSICRGNDANAIQKLLKLEHSSTFKVSSNCNSEFNEIDIQWEKPLEPICSSPRDCTNWPNSLCNSSTDGTKRCLCHSSFKWIGTGCQILPEDGLNKPHPRQRNIRISIIVVVIMAGLIVISCLVSYIYYKRRKVQHKKEQRTSFWGNQETTHLYESEKRIRDFMGSGMFGEDDRKAIEVPVFDLETILIATDNFSEANKIGRGGFGTVYKGRFSGGLEIAIKRLSQGSAQGVNEFKNEAILIAKLQHRNLVRLLGYCVAGEEKMLVYEYMPNKSLDFFMFGKPLTSTLPWLHFYLDIPKEISKPFLRFLLDQTQRLLLNWEMRFNIIIGIARGLVYLHEDSRLKIIHRDMKTSNVLLDAEMNPKISDFGLARIIDGKQTEAITNRVVGTYGYMSPEYALDGSFSVKSDVFSYGIVVLEIISGRRNTGFYQSKEALNLVGYVWNLWREKKAMEIAEVGIRKSCNPNEVVKCVGVGLLCVQEDPNDRPTMSNVAFMLSSGNDLASLPDPKQPAFVDKRLTPTSSATSSLGLKQEIVSNDYSLLEPR 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23537307 23540955 + ClCG02G011310.1 Cla02g01105 267231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01105 1042 SUPERFAMILY Protein kinase-like (PK-like) 676 1014 IPR011009 -
Cla02g01105 1042 ProSitePatterns Protein kinases ATP-binding region signature. 698 720 IPR017441 GO:0005524
Cla02g01105 1042 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Cla02g01105 1042 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 788 - -
Cla02g01105 1042 Pfam S-locus glycoprotein domain 242 321 IPR000858 GO:0048544
Cla02g01105 1042 Gene3D Phosphorylase Kinase; domain 1 666 767 - -
Cla02g01105 1042 SMART serkin_6 692 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01105 1042 Pfam Protein tyrosine and serine/threonine kinase 695 990 IPR001245 GO:0004672|GO:0006468
Cla02g01105 1042 Gene3D Transferase(Phosphotransferase) domain 1 803 1002 - -
Cla02g01105 1042 ProSiteProfiles Protein kinase domain profile. 692 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01105 1042 CDD STKc_IRAK 698 993 - -
Cla02g01105 1042 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Cla02g01105 1042 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 806 1024 - -
Cla02g01105 1042 Pfam PAN-like domain 356 408 IPR003609 -
Cla02g01105 1042 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Cla02g01105 1042 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 806 1024 - -
Cla02g01105 1042 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 788 - -
Cla02g01105 1042 CDD B_lectin 37 158 IPR001480 -
Cla02g01105 1042 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 183 IPR036426 -
Cla02g01105 1042 Pfam D-mannose binding lectin 83 178 IPR001480 -
Cla02g01105 1042 SMART blect_4 38 158 IPR001480 -
Cla02g01105 1042 Gene3D - 38 156 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00149 Cla-Chr2:1605511 Cla02g01105 Cla-Chr2:23537307 0 dispersed
Cla02g01105 Cla-Chr2:23537307 Cla03g00496 Cla-Chr3:5524353 2.86E-42 dispersed
Cla02g01104 Cla-Chr2:23535607 Cla02g01105 Cla-Chr2:23537307 3.30E-22 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80344 PF07714 PK_Tyr_Ser-Thr 3.60E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01105 - - cpep:111777045 1506.89