Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01138 ATGGCGGCAACTGTCTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCGGAGCTTCTCAAGGACCAGCAGGACCAGTCTCGCCAGGAATCGGAGCCCAGTGCCGACTTTCCATCTCTCGCCGCCGCGGCCGCCACCAAACCTAAGAAGAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGACCTATGGCGGTCCAAAGCCGTCCTCTCAATCCAGTGATCCAAAGGGTCTGACGGCTGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACGGCGGAGGAGATGGACCGCAACCGTCTTGGTGGAGGCTTCAAGAGTTGGGGTCAGAATAGTTTGTACGACAGGGGGAATCGGTATTCTAACGCGGAAGATTCACCGAATTCCCGACGGGGTTCTAGGGTTTTTGATGAGTCAAGGAGGAGCAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGATTGAGAGGAGAGAGAGAGGAGGAGGAGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGACGAATCGGATAGTTGGGTATCGAGTAAGAGCTTTACACCTTCTGAAGGTCGGAGATCAGGCGGTATGGGTGGTGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCTCGAGCGGTGGTGGCGCCGATTCAGACAGTTGGAGCAGAAAATCTGAAGGGGCTAGAGGTGGAATTGGTGAGAACGGTGGTGGGGCAGATTCGGAAAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCTGCAGCAAAGCCAAAGGGTTCCAATCCTTTTGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAAGACTGGAAGAAGATTGATGAGCAACTCGAATCAATGAAAATTAAGGATACGGTGGAGAGAACCGAGAAATCTAGTGGGGCTTCGTTTGAGAGAAAAGGCTTTGGAGTTAGAAGTGGTCGGTCTCCCGAAGATCGGTCAGTAAGGAGTTGGAGGAAGCCAGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGACGTGGTTGAAGATGGACCTGCTGAGGATTGA 1230 52.76 MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSSQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNAEDSPNSRRGSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGIERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGMGGGFDRERRGGFPSSGGGADSDSWSRKSEGARGGIGENGGGADSENWGKKSEGVRGGIGERPRLNLQPRSIPLNNGNQEASGAAAKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESMKIKDTVERTEKSSGASFERKGFGVRSGRSPEDRSVRSWRKPESVESRPQSADVVEDGPAED 409
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 24544299 24546472 + ClCG02G011610.1 Cla02g01138 267264
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01138 409 Pfam Plant specific eukaryotic initiation factor 4B 7 255 IPR010433 GO:0003743
Cla02g01138 409 Pfam Plant specific eukaryotic initiation factor 4B 225 361 IPR010433 GO:0003743
Cla02g01138 409 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 394 IPR010433 GO:0003743
Cla02g01138 409 MobiDBLite consensus disorder prediction 1 409 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 372 394 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 15 35 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 62 84 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 330 363 - -
Cla02g01138 409 Coils Coil 16 36 - -
Cla02g01138 409 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 394 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 139 176 - -
Cla02g01138 409 MobiDBLite consensus disorder prediction 120 138 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cla02g00442 Cla02g01138 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01138 Cla-Chr2:24544299 Cla08g01723 Cla-Chr8:29773372 1.86E-28 dispersed
Cla03g00488 Cla-Chr3:5396001 Cla02g01138 Cla-Chr2:24544299 7.88E-06 transposed
Cla02g00442 Cla-Chr2:4358727 Cla02g01138 Cla-Chr2:24544299 9.38E-122 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01138 - - csv:101214573 679.478