Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01155 ATGGGTTCTTTGAAGCTGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGGTTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGAAACAACTACACTTTTTCCAACTACTCCGACTCCCTCAAATCTCTGATGAATCTAACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGAAAAGCCTTCGGACTTCTCGCCGGAATCGCCTGTGACCGGTTTCCCACATGGGTGATCTTGCTTATTGGATCTCTTGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTTGTCGTTAGCCAAAGGATTTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTTTGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACTTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACCGCTCTGTTTTCCTCCGACCCATCTTCTTTCCTCCTCATGCTCGCCTTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCAACCACCGCCGCCGATACCCAACAAGAATCCAATTACTTCTCCGTCTTCAACGCTCTCGCCGTCGTCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTCCGGCAGGCTCTTCTCCCAAATATTCTCCATCGGGCTACTGATTCTCCTCGGATCCCCTTTGATCATCCCAATTTACACGTTTTTCAAGAGCTGGCACTCGAATCGAGCCGGATCGGATCTGGAAGCTCGAATTGAGGAGCCGCTACTGAAAGAAGAGGCAGCTGCGGCGCCGGTAAAGGAGGAAGCAGAGGAAATTGCAGAGGTAGAGCAGAGAGCGCCGGTGATCGGAGAAGAACACACGATTTTTGAAGCGGTGAGAACAATTGATTTCTGGGTGTTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCCGATGTTTCAGTGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTCGGCCGGATTCTTTCCGGAACACTTTCCGAGCATTTTCTCAAAAAAGTAGGCACACCAAGACCTCTATGGAACGCTGCATCTCAAATTCTAATGACCGTTGGATATGTTTTGATGGCCATGGCAATGCCAGGTTCTCTCTACATCGGCTCGGTCATCGTCGGGATCTGCTACGGCGTTCGTCTCTCCGTCACTGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCAATCGGATCCTTCCTCTTCTCTGGACTCCTTGCAGGGTTTCTCTACGACATGGAAGCGACCCCGACCGAGGGCGGCGGGAACACGTGCATCGGAGGGCATTGCTACAGAATTGTGTTTGTTGTGATGGCGTTGGCCTGTGTAATTGGGTTTGTTTTGGACATTTGGTTGGCATGTAGAACCAAAGAGCTTTATTCTAAGCTTAAAGCCAACAAGAAATCAAAGAAGGGAAACAACAATAACAACTCCTAG 1632 50.67 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDSLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSSDPSSFLLMLAFVPFAVCLFAMFFLREIPPPTTAADTQQESNYFSVFNALAVVVAVYLLCFDFIKNSGRLFSQIFSIGLLILLGSPLIIPIYTFFKSWHSNRAGSDLEARIEEPLLKEEAAAAPVKEEAEEIAEVEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSVFVSLTSIWGFFGRILSGTLSEHFLKKVGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLACRTKELYSKLKANKKSKKGNNNNNS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24894424 24898673 - ClCG02G011780.1 Cla02g01155 267281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01155 543 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 537 - -
Cla02g01155 543 Pfam Nodulin-like 14 260 IPR010658 -
Cla02g01155 543 SUPERFAMILY MFS general substrate transporter 14 522 IPR036259 -
Cla02g01155 543 Gene3D MFS general substrate transporter like domains 10 208 IPR036259 -
Cla02g01155 543 Gene3D MFS general substrate transporter like domains 318 526 IPR036259 -
Cla02g01155 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 537 - -
Cla02g01155 543 CDD MFS_Mch1p_like 13 510 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g00435 Cla02g01155 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01155 Cla-Chr2:24894424 Cla04g00930 Cla-Chr4:24266568 4.43E-95 dispersed
Cla03g00020 Cla-Chr3:244950 Cla02g01155 Cla-Chr2:24894424 4.14E-84 transposed
Cla06g00057 Cla-Chr6:594928 Cla02g01155 Cla-Chr2:24894424 6.74E-80 transposed
Cla07g01067 Cla-Chr7:27273020 Cla02g01155 Cla-Chr2:24894424 4.24E-81 transposed
Cla07g01172 Cla-Chr7:28730378 Cla02g01155 Cla-Chr2:24894424 2.20E-105 transposed
Cla11g00909 Cla-Chr11:15445097 Cla02g01155 Cla-Chr2:24894424 2.24E-101 transposed
Cla02g00435 Cla-Chr2:4286729 Cla02g01155 Cla-Chr2:24894424 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01155 - - cmos:111448555 857.055