Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01160 | ATGGCCGCTTTTCTCTCCACTTCTCTTTCCCCTTTCTTCTTCCTTCTTCTCTCAATCCTTCTCTCTACAGTCTCAGCCGATTCGCCATTGAAGACCTTCATCTTCCGTGTCGATCGTTTCTCTAAACCCTCTGTTTTTCCTACCCATTACCACTGGTACACTTCCGAATTCGCCGAATCCCCCAAAATCCTCCATGTTTACGACACTGTCTTCCACGGATTCTCTGCAACTTTAACTCAAGACCAAGTCGATTCCATCGGAAAACACCCTTCTGTGCTCGCCGTTTTTGAGGACCGTCGTCGTCAGCTTCACACCACCCGTTCCCCTCAATTTCTCGGCCTTCGAAACCAGCGTGGTCTCTGGTCTGATTCCGATTACGGCTCCGATGTAATCATTGGAGTTTTCGATACTGGGATTTCCCCTGAACGACGAAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAAGGGGTTTGTGAGACTGGAACTAAGTTCTCGGCCAAGAACTGTAACAGGAAGATCGTTGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCAGGGTCCAACGCCGCCGGTCCGATTATTGGGATAAACGACACGATTGAGTACAGATCTCCGAGAGACGCTGACGGCCATGGGACACATACGGCGTCGACGGCGGCCGGACGGCACGCGTTTCAGGCTAGTCTGGAGGGTTATGCTTCTGGAATAGCAAAGGGCGTGGCCCCTAAGGCGCGTTTAGCGGTTTACAAAGTTTGTTGGAAAAACTCGGGTTGTTTTGATTCCGATATTCTCGCGGCGTTTGATGCTGCGGTTAACGACGGCGTCGACGTCATTTCGATCTCAATTGGAGGCGGCGATGGCGTTTCCTCACCGTATTATCTTGACCCAATTGCAATCGGAGCGTACGGCGCCGCTTCCAGGGGTGTTTTCGTTTCGTCTTCGGCTGGGAACGATGGACCCAATGGAATGTCAGTGACGAACTTGGCGCCGTGGGTTACGACGGTTGGAGCAGGTACGATCGATCGGAATTTCCCGGCGGTGGTGACTCTGGGAAACGGACGAAAGATTTCCGGGGTATCGCTCTACGCTGGAGCGCCGTTGAACGGTACAATGTATCCATTGGTTTACCCTGGGAAATCAGGAGTGCTCTCTGTTTCGCTCTGTATGGAGAATTCGCTCGATCCTAAGGCTGTTGCCGGAAAAATTGTGATCTGCGACAGGGGAAGTAATCCCAGAGTGGCTAAGGGTTTGGTCGTGAAGAAAGCCGGCGGCGTCGGAATGATTCTAGCAAACGGAATCTCAAACGGCGAAGGACTCGTCGGCGATGCTCATCTTCTTCCCGCCTGCGCAGTTGGCTCCGACGAAGGCGATGCCATGAAAGCCTACGCATCGTCCTCCGCAAATCCCACCGCCACCATCGCCTTCCAAGGCACTATAATCGGAATCAAACCGGCGCCAGTTGTGGCTTCGTTTTCCGCCAGAGGGCCAAACGGATTAAACCCAGAAATTCTAAAACCAGACTTAATCGCACCAGGGGTTAACATTCTCGCCGCCTGGACCGACGCCGTTGGTCCAACCGGTTTGGACTTCGATACACGAAAAACAGAGTTCAACATCTTGTCCGGTACATCAATGGCTTGCCCCCATGTAAGTGGAGCTGCTGCTCTGTTGAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCCGCCATGATGACCACCGCAAGTATTACCGATAATCGCCGCCAACCAATGACGGAAGAATCCACCGGAAAAGCTTCAACGCCTTACGATTTCGGTGCCGGACATGTAAATTTGGGGCTCGCAATGGACCCAGGTCTGGTCTACGACATTACGAACGCCGATTACATAAACTTCTTATGCTCAATCGGGTACGGACCGAAGATGATTCAGGTAATAACAAGAAAACCCGTGACATGTCCGGCGAAAAAACCATTACCGGAAAATCTCAATTACCCATCAATCGTAGCAGTATTTTCTAGTCTATCAAAAGGGTGGTCGACGAAGTCGTTTATCCGAACGGCGACGAACGTGGGTCCATCAAATTCAGTGTACAGAGCTAAAATCGAAGCTCCAAAGGGGGTTACAGTGAAGGTAAAACCATCGAAACTGGTATTTTCATCGACGGTGAAGAAACAGAGCTTCGTAGTGGCAATATCAGCCGACAATCAGAATCTGGCTCTGGGCGATGTGGGCGCTGTTTTTGGTTGGCTTTCTTGGTCCGATGGAAAACATGTGGTTCGTAGCCCACTGGTGGTGACCCAATTAGAGCCTTTGTAA | 2319 | 51.32 | MAAFLSTSLSPFFFLLLSILLSTVSADSPLKTFIFRVDRFSKPSVFPTHYHWYTSEFAESPKILHVYDTVFHGFSATLTQDQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFSAKNCNRKIVGARFFSKGHEAGSNAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKISGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKAVAGKIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSANPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNADYINFLCSIGYGPKMIQVITRKPVTCPAKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTATNVGPSNSVYRAKIEAPKGVTVKVKPSKLVFSSTVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24979009 | 24981327 | + | ClCG02G011830.1 | Cla02g01160 | 267286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01160 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 546 | 556 | IPR023828 | - | |
Cla02g01160 | 772 | Gene3D | Peptidase S8/S53 domain | 129 | 629 | IPR036852 | GO:0004252|GO:0006508 | |
Cla02g01160 | 772 | CDD | Peptidases_S8_3 | 102 | 582 | IPR034197 | - | |
Cla02g01160 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 21 | 766 | - | - | |
Cla02g01160 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 102 | 616 | - | - | |
Cla02g01160 | 772 | SUPERFAMILY | PA domain | 390 | 469 | IPR046450 | - | |
Cla02g01160 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 21 | 766 | IPR045051 | - | |
Cla02g01160 | 772 | SUPERFAMILY | Subtilisin-like | 103 | 620 | IPR036852 | GO:0004252|GO:0006508 | |
Cla02g01160 | 772 | Pfam | Peptidase inhibitor I9 | 48 | 104 | IPR010259 | - | |
Cla02g01160 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 127 | 146 | IPR015500 | - | |
Cla02g01160 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
Cla02g01160 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 545 | 561 | IPR015500 | - | |
Cla02g01160 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 104 | IPR037045 | - | |
Cla02g01160 | 772 | Pfam | PA domain | 376 | 462 | IPR003137 | - | |
Cla02g01160 | 772 | Pfam | Subtilase family | 127 | 590 | IPR000209 | GO:0006508|GO:0008236 | |
Cla02g01160 | 772 | Pfam | Fibronectin type-III domain | 662 | 766 | IPR041469 | - | |
Cla02g01160 | 772 | Gene3D | - | 345 | 484 | - | - | |
Cla02g01160 | 772 | Gene3D | - | 633 | 769 | - | - | |
Cla02g01160 | 772 | CDD | PA_subtilisin_like | 351 | 477 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01160 | Cla-Chr2:24979009 | Cla09g00121 | Cla-Chr9:1241448 | 0 | dispersed | |
Cla10g00388 | Cla-Chr10:5273841 | Cla02g01160 | Cla-Chr2:24979009 | 0 | dispersed | |
Cla11g01151 | Cla-Chr11:24062722 | Cla02g01160 | Cla-Chr2:24979009 | 1.52E-94 | dispersed | |
Cla02g01160 | Cla-Chr2:24979009 | Cla01g01692 | Cla-Chr1:31854378 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01160 | - | - | csv:101217844 | 1441.4 |