Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01174 | ATGTCTGGTTCAAAGGAAGGAGTGATTATTGGAGAAAGAGAGCATAATGATGAGGAGCAGAGGAAGGACTATGTGGATCCACCAGCAGCTCCATTGATGGGGTTCTCAGAGTTGAAGAAATGGTCGTTTTACAGAGCTGTAATTGCAGAGTTTATGGCAACATTACTTTTCCTTTATATCACCATAGCCACTGCCATTGGAAACAACAATGCACAAACAACAGGGCCCTGTTATGGCGTTGGGGTTCTGGGCATAGCATGGGCCTTCGGCGCCGTCATCTTCGTCCTTGTTTACTGCACCGCCGGTATTTCAGGCGGCCATATCAACCCCGCCATCACGTTCGGGATGCTGTTGGCCAGAAAGTTGTCGCTGATTCGCGCGGTCGCTTACATAGCGGCGCAGTCTCTGGGAGCCATTGCCGGCGTTGCATTGGTTAAAGCTCTCATGAGGCACGCTTACAACAGCAACGGCGGCGGAGCCAATGTCGTCGCCGCCGGGTTCAGCAAAGGCGCCGCCCTTGGCGCCGAGATCATCGGCACTTTTTTGCTGGTGTACACTGTATTCTCCGCCACTGACCCAAAAAGAAACGCCCGAGACTCCCATGTTCCTGTTTTGGCTCCATTGCCTATCGGACTTGCGGTCTTTGTAGTGCATCTAGCTACGATTCCGATCACCGGCACCGGCATCAACCCTGCTCGGAGCTTGGGCGCTGCCGTCATGTTCAACAACAGAAGAGTTTGGAGTCAACATTGGATATTTTGGGTTGGGCCATTTGTTGGGGCGTTGGCAGCGGCGGCGTACCATCAATACGTTCTCAGAGCGGCGGCTGTCAAAGCTCTTGGATCCTTTCGTAGTAACCGTTCCGGCTAG | 870 | 53.1 | MSGSKEGVIIGEREHNDEEQRKDYVDPPAAPLMGFSELKKWSFYRAVIAEFMATLLFLYITIATAIGNNNAQTTGPCYGVGVLGIAWAFGAVIFVLVYCTAGISGGHINPAITFGMLLARKLSLIRAVAYIAAQSLGAIAGVALVKALMRHAYNSNGGGANVVAAGFSKGAALGAEIIGTFLLVYTVFSATDPKRNARDSHVPVLAPLPIGLAVFVVHLATIPITGTGINPARSLGAAVMFNNRRVWSQHWIFWVGPFVGALAAAAYHQYVLRAAAVKALGSFRSNRSG | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25220123 | 25223588 | + | ClCG02G011980.1 | Cla02g01174 | 267300 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01174 | 289 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - | |
Cla02g01174 | 289 | PANTHER | AQUAPORIN PIP-TYPE-RELATED | 17 | 287 | - | - | |
Cla02g01174 | 289 | Pfam | Major intrinsic protein | 37 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | TIGRFAM | MIP: MIP family channel proteins | 49 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | SUPERFAMILY | Aquaporin-like | 37 | 273 | IPR023271 | - | |
Cla02g01174 | 289 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 17 | 287 | IPR034294 | - | |
Cla02g01174 | 289 | CDD | MIP | 45 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | ProSitePatterns | MIP family signature. | 107 | 115 | IPR022357 | - | |
Cla02g01174 | 289 | Gene3D | Glycerol uptake facilitator protein. | 30 | 289 | IPR023271 | - | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 45 | 64 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 89 | 113 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 126 | 145 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 175 | 193 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 211 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | PRINTS | Major intrinsic protein family signature | 251 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g01174 | 289 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla02g00420 | Cla02g01174 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01120 | Cla-Chr2:23970895 | Cla02g01174 | Cla-Chr2:25220123 | 3.71E-21 | dispersed | |
Cla02g01174 | Cla-Chr2:25220123 | Cla02g02062 | Cla-Chr2:35637260 | 4.62E-140 | dispersed | |
Cla02g00420 | Cla-Chr2:4119110 | Cla02g01174 | Cla-Chr2:25220123 | 3.40E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01174 | K09872 | - | mcha:111015529 | 455.677 |