Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01181 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGGATCGACATGTGCACAAAGGTTCCGATGCTGGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGTAAGGCACTGAAACTTCTTCGATCTTCCATATCCTGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACCGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAATTGTAAAGGCAACAGGGGAAGTTTTGTCTGTTCAGTTGTCAGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACATATTGTAGTCTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCCATCAAAAAACCCATACTGAGTGCTGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATCGTCCAAAACCATCCACGTAATGGAAGTGCAAGAAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCTGATTTGAAGAAGATTGACCGTGGTGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTTGACTCAAACCTTGTGAGCCGGGCTAGCTCTACAAAATGTGCAAGCCTATCCGTGCGAGGGGGTGGAGTTAACTTACGTCCGAACTCATTGGCCCCTTGCACCACACCATCAGACACTGGCATGGCCTGA 1230 46.67 MFSELMNFLRACFRPRSDRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKSKALKLLRSSISWFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRIVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSTKCASLSVRGGGVNLRPNSLAPCTTPSDTGMA 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25301031 25303772 + ClCG02G012050.1 Cla02g01181 267307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01181 409 Pfam Protein phosphatase 2C 79 336 IPR001932 -
Cla02g01181 409 ProSiteProfiles PPM-type phosphatase domain profile. 47 367 IPR001932 -
Cla02g01181 409 CDD PP2Cc 48 367 IPR001932 -
Cla02g01181 409 PANTHER ALPHABET, ISOFORM E-RELATED 5 399 - -
Cla02g01181 409 SUPERFAMILY PP2C-like 59 368 IPR036457 -
Cla02g01181 409 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Cla02g01181 409 SMART PP2C_4 39 365 IPR001932 -
Cla02g01181 409 Gene3D - 36 379 IPR036457 -
Cla02g01181 409 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 399 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g00410 Cla02g01181 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02007 Cla-Chr1:34701310 Cla02g01181 Cla-Chr2:25301031 0 dispersed
Cla02g00668 Cla-Chr2:7668762 Cla02g01181 Cla-Chr2:25301031 2.62E-139 dispersed
Cla02g01181 Cla-Chr2:25301031 Cla10g00051 Cla-Chr10:559323 0 dispersed
Cla06g00423 Cla-Chr6:5159093 Cla02g01181 Cla-Chr2:25301031 5.55E-155 transposed
Cla10g01669 Cla-Chr10:32406360 Cla02g01181 Cla-Chr2:25301031 4.52E-131 transposed
Cla02g00410 Cla-Chr2:4009353 Cla02g01181 Cla-Chr2:25301031 5.69E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01181 - K01102 csv:101221640 772.311