Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01189 | ATGAGAGCTCATCGTTTGAGCTTCTTCACTTCCTTTATATTTTTATTCCCTACATTCATCACAGCCACAGGCTTCACGCTTCTCCACGATTCCTCCATTTCCTACAGGAGAATTCTGCATCAGCCGCTCTTTCCGGTTGCCTCTGAGCCGCCGCCTGACATTGACTTGTCTCCACCGCCCCCGCCGCCGGATTCTCCTTCCGACGATCAGCCGTTTTTCCATGAGCTGCCCACCAGTCCAGATCAGAGTCAACCTCCTCCTTCCTCATCTAATGGAACTATGCCAATCCCTGCCTCTACGGCGCAACCGTCCAAGCCCACCAAGACTGTTGCAATTGCCATTTCCGTTGGGATTGTGACTTTGGGGATGCTTTCAGCTCTCGCTTTCTTTTTGTATCGTCACCGTGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAATAATCCGGAGAGATTTGTGGAGGACTCGAGAGCGCCGCCCTCGAGTTTTTTCTATATCGGAACTGTTGAGCCGAGTCAGAGCTCTATTGTGGAGCAGAATGGTGCCAATGGTGCTAACAGTTCGCCTTATCGCAAGCTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCAGAGTTGCAGCCACTGCCGCCACTGCCAAAACCACCGGTGGCTATGTCGCCTCCGGCTTTGTCGTCTTCCGATGAGGAAAGCCAGGACACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCACGATGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAGAGCTGTTCCACGGCAAGTTTCAAGAATGACCATATGAATTCCAATCCTCCTCCCATTCCTCATTCCAAAAGGACGTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGCACTTCGTCTCAGCCTCAGCCTCAGCCTCAGCCACCGCCGCCGCCGCCTCCTCCACCGCGTCCGTTTGATGATTTTCGCGAAATTCCGAATTCGAAAGAGACAATGCCTTTCTCGTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCAACCACATTTCCTCAAGTTCCGCAACCTGCTGTAGCTCCACCTCCACCTCCACCTCCGCCTCCGCCGCCCCCACCCCCACCCCCACCCCCACCCCCACCTCCACCTCCGCGACTACCGGCGCGTCCGGTCTCCTATTCAACGCCACAAAAACTAGGGTTATCAGAAACCAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAGTCACAATCCTACTCAACAGCGAGGTCAAACTCTTCCCCGAAATCCACACCGAGTTCTGTGACAACAAATTCTGCTAAAGAAGACGTTGCCCCGAGGATTAATTCTATGGAGAGGCTCGAAGCAGAGGATGCAGAAGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTGTTCGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATAGGGTATTGGACCCAAAAAAGTCTCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTGAGTGCTTTCTATATTGCTGTCCAATTATGAATTCTTTTCATAATTTGGGATCTGTCATACGGAAGGATTTGCTCATAATCATGGCTGTAATGACTATTTTTGATAATAAGCATATGTTTGAAGGAATGACCACACTGCCATCATTATCAGCATTAGAATATTGGTCATCATTTTGCATCCTTATTTTAGTTGATGCTGTTTTTATTCATTCCCTGGGCATTATTATCGATGTTATATTCTTTCCTGCCATTTTTGCTATTCTTCCTGTCACACCTACGCATAATTGCTTCACTAGTTCTAGATGGCCTAGGGAAAGTGCCTTGCTCATTAGATGGAGATTCTTTGCAATACAGAGTTTAGCTGGCGCTATGCGACCTTACTTAAACATGATCTATTCTATAAGTCGTAGAATAGTGTTATCGAGTTCCAAAAATCTGAGTCATAGTGCATTGGAGCATGGAAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTAAGGAAATCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTGAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCGGTTCTTAAGACAGGAAATAGGATGAATGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTCGATATAAAGGGAACGGATGGGAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTTCGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTAAAAAAAGCGGCAGGGATGGACTCAGACGTCTTGAGCAGTTATGTCACAAAGCTCGAGATGGGGCTTGAAAAAGTAAGGTTGGTTTTGCAATTTGAAAGGCCAGGAATGCAGGGAAAATTCTTCAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATTAAAGCTGACGAAAGGCAAGCTTTATCGCTTGTGAAAGCAGTCACAGAGTATTTCCATGGTGATGCTGCTAAGGAGGAAGCACATCCCTTCCGAATATTCATGATCGTTCGGGATTTCCTAACTGTACTGGATCAAGTATGCAAAGAAGTTGGGAGAATGCAAGACGGAGTAATGGTTGGTGCTGCCAGATCCTTTCGGATATCTGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAACGTCAGACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA | 3231 | 46.8 | MRAHRLSFFTSFIFLFPTFITATGFTLLHDSSISYRRILHQPLFPVASEPPPDIDLSPPPPPPDSPSDDQPFFHELPTSPDQSQPPPSSSNGTMPIPASTAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFVEDSRAPPSSFFYIGTVEPSQSSIVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESQDTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNPPPIPHSKRTSPKSRFSVSSTKRTSSQPQPQPQPPPPPPPPPRPFDDFREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSTTFPQVPQPAVAPPPPPPPPPPPPPPPPPPPPPPPPRLPARPVSYSTPQKLGLSETRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSVTTNSAKEDVAPRINSMERLEAEDAEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGECFLYCCPIMNSFHNLGSVIRKDLLIIMAVMTIFDNKHMFEGMTTLPSLSALEYWSSFCILILVDAVFIHSLGIIIDVIFFPAIFAILPVTPTHNCFTSSRWPRESALLIRWRFFAIQSLAGAMRPYLNMIYSISRRIVLSSSKNLSHSALEHGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRSQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFERPGMQGKFFNSMKTFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTVLDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP | 1076 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25442545 | 25447064 | + | ClCG02G012130.2 | Cla02g01189 | 267315 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 310 | 329 | - | - | |
Cla02g01189 | 1076 | PANTHER | FORMIN-RELATED | 19 | 581 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cla02g01189 | 1076 | PANTHER | FORMIN-RELATED | 728 | 1076 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 49 | 68 | - | - | |
Cla02g01189 | 1076 | Gene3D | Formin, FH2 domain | 470 | 583 | IPR042201 | - | |
Cla02g01189 | 1076 | Pfam | Formin Homology 2 Domain | 729 | 1025 | IPR015425 | - | |
Cla02g01189 | 1076 | Pfam | Formin Homology 2 Domain | 481 | 580 | IPR015425 | - | |
Cla02g01189 | 1076 | PANTHER | FORMIN-LIKE PROTEIN 6 | 19 | 581 | - | - | |
Cla02g01189 | 1076 | PANTHER | FORMIN-LIKE PROTEIN 6 | 728 | 1076 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 228 | 309 | - | - | |
Cla02g01189 | 1076 | SMART | it6_source | 476 | 1040 | IPR015425 | - | |
Cla02g01189 | 1076 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 476 | 1051 | IPR015425 | - | |
Cla02g01189 | 1076 | Coils | Coil | 972 | 992 | - | - | |
Cla02g01189 | 1076 | Gene3D | Formin, FH2 domain | 714 | 1040 | IPR042201 | - | |
Cla02g01189 | 1076 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 393 | 590 | - | - | |
Cla02g01189 | 1076 | PRINTS | Proline rich extensin signature | 200 | 212 | - | - | |
Cla02g01189 | 1076 | PRINTS | Proline rich extensin signature | 281 | 297 | - | - | |
Cla02g01189 | 1076 | PRINTS | Proline rich extensin signature | 214 | 230 | - | - | |
Cla02g01189 | 1076 | PRINTS | Proline rich extensin signature | 309 | 326 | - | - | |
Cla02g01189 | 1076 | PRINTS | Proline rich extensin signature | 369 | 394 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 466 | 481 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 49 | 106 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 208 | 224 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 414 | 464 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 198 | 481 | - | - | |
Cla02g01189 | 1076 | MobiDBLite | consensus disorder prediction | 374 | 409 | - | - | |
Cla02g01189 | 1076 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 729 | 1036 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01189 | Cla-Chr2:25442545 | Cla07g00231 | Cla-Chr7:2572105 | 6.80E-15 | dispersed | |
Cla07g00225 | Cla-Chr7:2464641 | Cla02g01189 | Cla-Chr2:25442545 | 9.47E-27 | dispersed | |
Cla02g00812 | Cla-Chr2:10752978 | Cla02g01189 | Cla-Chr2:25442545 | 1.39E-20 | transposed | |
Cla03g01635 | Cla-Chr3:32236458 | Cla02g01189 | Cla-Chr2:25442545 | 3.10E-23 | transposed | |
Cla05g01545 | Cla-Chr5:25829697 | Cla02g01189 | Cla-Chr2:25442545 | 6.03E-22 | transposed | |
Cla05g02507 | Cla-Chr5:36432735 | Cla02g01189 | Cla-Chr2:25442545 | 1.73E-18 | transposed | |
Cla08g00895 | Cla-Chr8:21415552 | Cla02g01189 | Cla-Chr2:25442545 | 5.01E-18 | transposed | |
Cla11g00087 | Cla-Chr11:1122841 | Cla02g01189 | Cla-Chr2:25442545 | 1.19E-32 | transposed | |
Cla01g01710 | Cla-Chr1:32046639 | Cla02g01189 | Cla-Chr2:25442545 | 5.28E-32 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01189 | - | - | cmo:103497354 | 642.884 |