Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01190 | ATGGGAGGAAGTATAAAATTGAGCTTTGTTGTGGTTTTTGTTATTGTTTTGACATCGTTGTTTGCGGTTGTTCCGACAGCCGAAGCACAGCTCCGACGAGATTTCTACGCAGATGTCTGCCCTAATGTGGAGTCCATAGTCCGACAGGCTGTAACCAAGAAGTTCAAACAAACATTCGTCACTGTTCCCGCTACCCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCAGTGATGATTGCTTCAACTGGAGGTAACACCGCAGAGAAGGATCATCCTGACAATCTTTCATTGGCCGGAGATGGATTTGATACTGTCATCAAAGCCAAAGCGGCGGTTGACGCTGTGCCAGGTTGTAAGAATAAAGTCTCTTGCGCCGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGTTGGTGCTGCTAGAGGTCCTTCTTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTTGTTTCAAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAGCTCAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAACTGATATGATTGCTCTTTCTGCTGCGCACACCGTAGGATTCTCTCACTGCAGCAAATTCGCAAATCGGATATACAATTTCAGCCGTACAAATGGAGTTGATCCAACGCTGAACGCCACATACGCAACCATGCTTCAAGGCATGTGCCCCAAAAACGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACTAGGTTCGACAATATGTACTTCAAGAATCTCCAACAAGGAATGGGCCTTTTCACTTCCGACCAAATTCTTTTCACTGATTCAAGGTCCAAGCCCACTGTCAAGATTTGGGCCCATAGTGGACAAACCTTCTACACGGCCTTCGTTGATGCCATGACCAAGTTGGGTCGGGTCGGAGTCAAGACCGGATCCAATGGCAACATCCGTACTGATTGTGGTGCTTTCAACTCTTGA | 1014 | 46.55 | MGGSIKLSFVVVFVIVLTSLFAVVPTAEAQLRRDFYADVCPNVESIVRQAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASTGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLVGAARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKFANRIYNFSRTNGVDPTLNATYATMLQGMCPKNVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQILFTDSRSKPTVKIWAHSGQTFYTAFVDAMTKLGRVGVKTGSNGNIRTDCGAFNS | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25463472 | 25465739 | + | ClCG02G012150.1 | Cla02g01190 | 267316 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 310 | 323 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 254 | 269 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 148 | 163 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 195 | 207 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Plant peroxidase signature | 270 | 287 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | CDD | secretory_peroxidase | 30 | 335 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g01190 | 337 | Pfam | Peroxidase | 47 | 299 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 336 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PANTHER | - | 9 | 336 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 196 | 206 | IPR019793 | - | |
Cla02g01190 | 337 | Gene3D | Peroxidase, domain 2 | 174 | 315 | - | - | |
Cla02g01190 | 337 | PRINTS | Haem peroxidase superfamily signature | 256 | 271 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Haem peroxidase superfamily signature | 196 | 211 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Haem peroxidase superfamily signature | 127 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | Gene3D | - | 34 | 336 | - | - | |
Cla02g01190 | 337 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 336 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01190 | 337 | PANTHER | PEROXIDASE | 9 | 336 | - | - | |
Cla02g01190 | 337 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01190 | Cla-Chr2:25463472 | Cla11g00913 | Cla-Chr11:15495659 | 6.19E-133 | dispersed | |
Cla05g01799 | Cla-Chr5:29898887 | Cla02g01190 | Cla-Chr2:25463472 | 3.98E-150 | transposed | |
Cla01g01701 | Cla-Chr1:31950093 | Cla02g01190 | Cla-Chr2:25463472 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01190 | K00430 | - | csv:101208254 | 592.808 |