Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01190 ATGGGAGGAAGTATAAAATTGAGCTTTGTTGTGGTTTTTGTTATTGTTTTGACATCGTTGTTTGCGGTTGTTCCGACAGCCGAAGCACAGCTCCGACGAGATTTCTACGCAGATGTCTGCCCTAATGTGGAGTCCATAGTCCGACAGGCTGTAACCAAGAAGTTCAAACAAACATTCGTCACTGTTCCCGCTACCCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCAGTGATGATTGCTTCAACTGGAGGTAACACCGCAGAGAAGGATCATCCTGACAATCTTTCATTGGCCGGAGATGGATTTGATACTGTCATCAAAGCCAAAGCGGCGGTTGACGCTGTGCCAGGTTGTAAGAATAAAGTCTCTTGCGCCGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGTTGGTGCTGCTAGAGGTCCTTCTTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTTGTTTCAAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAGCTCAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAACTGATATGATTGCTCTTTCTGCTGCGCACACCGTAGGATTCTCTCACTGCAGCAAATTCGCAAATCGGATATACAATTTCAGCCGTACAAATGGAGTTGATCCAACGCTGAACGCCACATACGCAACCATGCTTCAAGGCATGTGCCCCAAAAACGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACTAGGTTCGACAATATGTACTTCAAGAATCTCCAACAAGGAATGGGCCTTTTCACTTCCGACCAAATTCTTTTCACTGATTCAAGGTCCAAGCCCACTGTCAAGATTTGGGCCCATAGTGGACAAACCTTCTACACGGCCTTCGTTGATGCCATGACCAAGTTGGGTCGGGTCGGAGTCAAGACCGGATCCAATGGCAACATCCGTACTGATTGTGGTGCTTTCAACTCTTGA 1014 46.55 MGGSIKLSFVVVFVIVLTSLFAVVPTAEAQLRRDFYADVCPNVESIVRQAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASTGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLVGAARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKFANRIYNFSRTNGVDPTLNATYATMLQGMCPKNVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQILFTDSRSKPTVKIWAHSGQTFYTAFVDAMTKLGRVGVKTGSNGNIRTDCGAFNS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25463472 25465739 + ClCG02G012150.1 Cla02g01190 267316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01190 337 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 CDD secretory_peroxidase 30 335 IPR033905 GO:0004601|GO:0042744
Cla02g01190 337 Pfam Peroxidase 47 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 ProSiteProfiles Plant heme peroxidase family profile. 30 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PANTHER - 9 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Cla02g01190 337 Gene3D Peroxidase, domain 2 174 315 - -
Cla02g01190 337 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 Gene3D - 34 336 - -
Cla02g01190 337 SUPERFAMILY Heme-dependent peroxidases 30 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g01190 337 PANTHER PEROXIDASE 9 336 - -
Cla02g01190 337 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01190 Cla-Chr2:25463472 Cla11g00913 Cla-Chr11:15495659 6.19E-133 dispersed
Cla05g01799 Cla-Chr5:29898887 Cla02g01190 Cla-Chr2:25463472 3.98E-150 transposed
Cla01g01701 Cla-Chr1:31950093 Cla02g01190 Cla-Chr2:25463472 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01190 K00430 - csv:101208254 592.808