Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01198 | ATGAAAGAGAAAAATGAAGAGAGAAAATTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATCCGAGAGCCTAATAAACGCTCTCGAATTTGGCTCGGTTCTTATTCCTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCCCGCCTTAATTTTCCTGACTTTTTCACCACCGTTGACCGCTCCTTCCCTCTCTCCGCCGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCATGTCGACGCCCTCGAGTCGTCTCTCCGACATCACTTCGTCAATTCCTCCGACCAAAGTCCCAACCCCACGAAGCTTCGTTCTTCTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCTGACCCGGAAGACGCCGATGGCGACTGCGCTAGCACTCATTGGACAAGCTGA | 465 | 54.84 | MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHWTS | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25514942 | 25515406 | + | ClCG02G012230.1 | Cla02g01198 | 267324 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01198 | 154 | CDD | AP2 | 11 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | Pfam | AP2 domain | 12 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | PRINTS | Ethylene responsive element binding protein signature | 13 | 24 | IPR001471 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | PRINTS | Ethylene responsive element binding protein signature | 51 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 6 | 144 | - | - | |
Cla02g01198 | 154 | Gene3D | AP2/ERF domain | 11 | 70 | IPR036955 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | MobiDBLite | consensus disorder prediction | 108 | 154 | - | - | |
Cla02g01198 | 154 | MobiDBLite | consensus disorder prediction | 108 | 131 | - | - | |
Cla02g01198 | 154 | SMART | rav1_2 | 12 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Cla02g01198 | 154 | SUPERFAMILY | DNA-binding domain | 12 | 70 | IPR016177 | GO:0003677 | |
Cla02g01198 | 154 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 | 6 | 144 | - | - | |
Cla02g01198 | 154 | ProSiteProfiles | AP2/ERF domain profile. | 12 | 69 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01659 | Cla02g01198 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01198 | Cla-Chr2:25514942 | Cla05g02061 | Cla-Chr5:32319879 | 2.11E-55 | dispersed | |
Cla01g01659 | Cla-Chr1:31472560 | Cla02g01198 | Cla-Chr2:25514942 | 4.51E-49 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60648 | PF00847 | AP2 | 2.90E-11 | CL0081 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01198 | K09286 | - | csv:101209150 | 247.284 |