Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01205 ATGGAAGCTAATATTCATGATCTTAAGGTGCCTCTAAATCCACGGGGCCTCAATAATGAAGACAGAGCAGTAGAAATCATAGAAGCCGGAGGATTCCCCGGCGACGAATTTTCAGAACAAGGCATTGCAGCAACATGTCGTCTAAGAGTCCCAAGAATAAGCTGCCCAGCCAAAGTCCGTTCTCTTCAAAAAGCCCTAGCCATGGTCCACGGCGTAAAACGAGCAACCGTAGTTCTCGAAATCGAAGAAGCCAAAGTCCTCTTCGATCCAAATTTAACCACAGAGACCCTAATCCTCACAGAAATCGACAATTCCGGCTTCGAAGCCGAGCTCATCTCCGCTGCAGACGAAGCCTACAAAGTTCACATAAAACTTAATCGAGCGAGCCCCGGAGACATGCCCGCCATCAAATCCTCTCTCGAGCAAGCTCCGGGAGTGAACTGTGTGGAAATGGAGGCGATAGGGCGGATGGTAGCCATCGGCTACGACCCTGATCGGACGGGTCCAAGGTGCCTTCTGCAGTTCCTGGAGAAGTATGGAGCAAGCTTGTATGTGCCTCCGAAGAGAAGAGATGTGGAGCAGCTTCAAGAAGCTTGTGCTTATAGGAATTTGTTCTTGCTGAGCTGCTTGTTTTCTGTTCCAGTGGTGGCTTTTGCAATGGTGCTTCCAATGCTTCCTCCTTATGGAGATTGGTTGAATTTTAGGGTTTGCAGTATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACTCCAGTCCAGTTCCTTGCTGGTCGCAGATTTTATGTAGGATCATACCGCGCATTACAACGGAAATCTGCAAATATGGATGTTTTGGTCGCTGTAGGCACCAATGCAGCTTACTTTTACTCAGTATACATAGTTTTTAAAGCATCCACTTCCAACTCTTTTAAGGGGAAAGATTTCTTTGAGACTAGCTCCATGTTGATCTCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAAGGCAAATCATCAGATGCTTTAGCACAGCTTGCTCATCTTGCTCCTGATACAGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGGTGGAGATTGATACCCAACTCATACAGAGGAATGACATAATTAAGATTGTTCCTGGGGCAAAAGTTCCTGTTGATGGGGTTGTTATTAGTGGTGAAAGCAATGTGAATGAAAGTACAATTACAGGAGAAGCAAGATCCATTGGCAAATCAACTGGTGATAAGGTTATTGGAGGGACTGTCAATGAAAATGGATGCTTATTTGTTAAAACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTCGTGGAATCGGCTCAGCTATCACGAGCCCCAGCTCAAAAATTAGCAGATCAGATATCAAAGTTCTTTGTTCCTGTTGTTGTTGTGGCAGCATCTGTGACATGGCTGGGATGGTTAATTTGTGGAGAACTTGGTTTATACCCCAAACATTGGATACCAAAAGGCATGGATGAGTTTGAACTTGCCCTGCAATTTGCCATTTCAGTGCTGGTGATTGCATGCCCGTGTGCCCTTGGTTTAGCAACGCCGACTGCGATCATGGTTGCGTCGGGAAAAGGTGCTTCTCTAGGTGTGCTCATTAAAGGGGCAAGTGCACTTCAAAATGCATACAAGGTGAAAACAGTAGTTTTTGACAAGACTGGAACTCTGACAATTGGGAGGCCAGAGGTAGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGTGATGTAGCAATAGCAATTGAGTCAAACAGCGAACACCCTCTAGCAAAATCTGTAGTGGAGCATGCAAAGAAAATGAGAAAGAAGTTTGGGGCCCGAAGTGAATGTCGCAAACGCATCCAGAACTTCGAGGTGTTCCCGGGAGAAGGGGTTGGAGGAAGAATTGATAGAAAGACAGTTTTAGTAGGAAACAGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGGTATGTTATAGAAAACGAGCGACTGGCTCAAACATGTGTCTTGGTGGCTATTAATGGCAGGGTAGCAGGAGGTTTTGGTGTTATAGATGCGCCAAAGCCTGGGACTAAAGCTGTCATATCATTTCTTCGTTCGATTGGCATCTCAACCATAATGGTCACCGGAGATAACTGGGCCACAGCCTTCGCGACGTCAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAATGACTCACATGCCTTAGCTGCAGCTGATGTCGGTATTGCAATTGGTGCTGGAACAAATATTGCTATTGAAGCAGCTGATATTGTTCTAATGCGAAGCAATTTAGAAGATGTGGTTACTGCTATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATTTGGGCTCTTGGCTACAATATCATCGGCATGCCTATTGCTGCCGGAATCCTATATCCCTTCTTTGGAATCCGATTGCCACCGTGGCTTGCCGGTGCATGTATGGCTGCTTCCTCCCTTAGTGTTGGTTTCCAGCCGATAACCCACCTCAGTTTTAGCTTCGTATTTTCTTTGGATTTTGGTTTCCCACTGTATGAATTGGACCCCGATCCGAACCCCCATTGTGGATTTGGGTTTAAGTTTTCATCGGCAGCTTCGCCAAAGTCAATGGCGTCGAAGGCTTCTTTGCCTTCTCCTTCGGCCGACAGATCGGACCTGCACGATGACACCCAGATAATGATACCACGAGGACAAGATCCTACTCCTAAGGAGATCTTATCACTCATTGAATTTCTAAAGAAGCAAGTTGCTGGCGAACGTTGTAACTCCGTACAGAAAAGAATGGAAGAAAACAAGCAGAAGTTGGTTGCCATCACCACTCACTTGTTGAAATCATCAACAGAAAGAAGGATAAGAAGGACAAGTGATTCAGATAAGGGGGTGGATCTATTGACGAAGAGGCAGAAAGATGCACTTGATATGCAGAATGGTATAGATGTAAGTGATGGGGAAAATGACCAATCTCAAGAAGATGGCCATGCATCTTCTGCAGTTCTTCTTGGATCTAATGTTGCAGTAAGAAATGCTGTACGACCTATTAAGCTTCCTGAAGTTAAAAGATTGCCTCCTTATACTACATGGATATTTTTGGACAGAAACCAGAGAATGACTGAAGATCAATCTGTGGTTGGTCGAAGGAGAATTTATTATGGTCAAAGTGGAGGAGAAGCCCTCATTTGCAGTGACAGTGAGGAAGAAGTAATTGATGACGAAGAGGAAAAGAGAGATTTTGTGGAATCTGAAGATTATATACTTCGGTTGACTATGAGGCCTAGATTTATTTTTGGTGATTGGTCCATTAGCCTTAATTCTGATTGGATTCCTCGGGACAGAATCTGTTTAGGTTTGAGATTATATGGTTGGTTCATCCTTCTTTTAAAGAGTTGTTGCCCTTGTGGTGGAATGTTAAGCATGACAATGAAAGAAATTGGTTCATCTGATCTGGTGCTAGAGTCCCTTGCCAATTGTTTCTCTAGAAGTCCTGGTGAAATAAAGGCAAGATATGAAGTGCTTACCCAGGGAGAAAGGGCTATAGGGTGTTTTAATAATAGGATCAATGAGGAGATCTCACATATTGGAAGTACTCTTCTTGATAAAGATCTTGATGCAGCTCTTGATTCCTTTGACAATCTATTTTGCCGTCGTTGCCTTGTCTTTGATTGTAGACTACATGGTTGTTCCCAAGATCTTGTCTTTCCTGCTGAGAAACAACCTAAATGGGGTCCTGTAGGTGAGGAAAATGCACCATGTGGTCCACTCTGCTATCGATCAGTGCTGAAATCAGACAAAAATGGTACAGGGGGTTCTCCACTTCGCAGTGACTTGGAAGAAAAACATCCCATGTCATCTGATGGTACTGGAGCTCAAATCTCTACGAAGAAGAAATCTTCTTGTAAAACTGGTCGAAGAAGGGCAAAATCCTATCAAAGTGAAAGTGCCTCATCAAATGCAAAGAACATATCAGAAAGCAGTGAGTCAGAGAATGGACCCAGGCAGGATGGGAATACTATTCATCAATCACCTCCACCAAATTCTAAGATAACAGGAGCGGGTGGAATTCGAAAAAGGAACAGCAAGCGTGTTGCTGAGCGTGTTCTCATTTGCATGCAGAAAAGGCAGAAGAAAATGGCTGCTTCTGAGTCAGAATCTCTAGCCAGTGTAGGTCATTGTCCAAATGATGTGAAATTAAAATCTAACTCATGTAAAGAAAATGACGATACTAGTTCTTCTTCACGTAAGAATATTAGATCTCCTATACCTGGAAGGTCTAGGAGGAGGGAATCCCTGACTCAGAAATGCAACAAATTTGACCAGAATGAAACACTCAATAATTCATCAAATGAGATAATTACTCATCTACCAGCCGACAGTTGTGATGACAACTCAAGGAAAGAAGAGTGTGTGGATGAAAATTTATGCAAGCAGGACTTGGCAGATGATAAATCTTGGAAGGCTATTGAAAAAGGGCTCTATGAGAAGGGTATTGAGATTTTTGGTAGGAACAGCTGCTTAATAGCAAGGAATTTACTAAATGGGATGAAGACCTGTTGGGAGATTTTTCAATACATGAATTATTCTGAGAACAAGAATGGCAGCCAAGTGGGTGATGGGTCAAATCCTCATCTTGAAGGTTACACCAAGGGTAATAATGAAGTGAGAAGAAGGTCAAGATTCTTACGTAGAAGGGGTAGAGTTCGTCGACTGAAATATACCTGGAAATCAGCTGCTTACCATTCTATTCGGAAGCGAATAACTGAAAGGAAAGATCAGCCGTGCAGACAGTATAATCCATGTGGTTGCCAAACTGCCTGTGGAAAGCAGTGTGCCTGTCTTTTAAATGGCACCTGCTGTGCCCTAAGAGTTGCAAGAATCGTTTTAGAGGATGCCATTGTGCCAAAAGTCAATGTCGTAGTCGTCAATGTCCTTGTTTTGCAGCAGATAGAGAATGTGATCCAGATGTTTGTAGGAATTGTTGGCTGTGGTGATGGTACTCTCGGGGTTCCCAACCAAAGAGGTGACAATTATGAGTGCAGGAACATGAAGCTTCTTCTGAAACAACAACAAAGAGTAATCACACTTTACTGTTTCTTTGCTTTTTTTCTTACTCAGGTGTTACTCGGAAGATCTGATATATCTGGTTGGGGAGCATTTCTAAAGTTTGTTCTTGATGCGTACCGAAAGGGCGATAAATTAAAATTTGCTAATCATTCTCCGGATCCAAACTGCTACGCCAAGGTCATCATGGTTGCGGGAGATCACCGGGTTGGCATCTTTGCCAAGGAAAGAATCAGTGCTGGGGAGGAACTCTTTTATGATTATAGATATGAGCCTGATCGAGCCCCGGCTTGGGCAAGGAAGCCTGAGGCATCGGGGTCAAAAAAAGACGACGGTGCTCCATCGAGTGGACGAGCAAAGAAACTTGCTTAA 5499 43.54 MEANIHDLKVPLNPRGLNNEDRAVEIIEAGGFPGDEFSEQGIAATCRLRVPRISCPAKVRSLQKALAMVHGVKRATVVLEIEEAKVLFDPNLTTETLILTEIDNSGFEAELISAADEAYKVHIKLNRASPGDMPAIKSSLEQAPGVNCVEMEAIGRMVAIGYDPDRTGPRCLLQFLEKYGASLYVPPKRRDVEQLQEACAYRNLFLLSCLFSVPVVAFAMVLPMLPPYGDWLNFRVCSMLTVGMVLKWIFCTPVQFLAGRRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFKGKDFFETSSMLISFILLGKYLEVMAKGKSSDALAQLAHLAPDTACLMTFDDHGNLLSEVEIDTQLIQRNDIIKIVPGAKVPVDGVVISGESNVNESTITGEARSIGKSTGDKVIGGTVNENGCLFVKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADQISKFFVPVVVVAASVTWLGWLICGELGLYPKHWIPKGMDEFELALQFAISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKTVVFDKTGTLTIGRPEVVSVVLFSTFPMQELCDVAIAIESNSEHPLAKSVVEHAKKMRKKFGARSECRKRIQNFEVFPGEGVGGRIDRKTVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCVLVAINGRVAGGFGVIDAPKPGTKAVISFLRSIGISTIMVTGDNWATAFATSGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFFGIRLPPWLAGACMAASSLSVGFQPITHLSFSFVFSLDFGFPLYELDPDPNPHCGFGFKFSSAASPKSMASKASLPSPSADRSDLHDDTQIMIPRGQDPTPKEILSLIEFLKKQVAGERCNSVQKRMEENKQKLVAITTHLLKSSTERRIRRTSDSDKGVDLLTKRQKDALDMQNGIDVSDGENDQSQEDGHASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYGQSGGEALICSDSEEEVIDDEEEKRDFVESEDYILRLTMRPRFIFGDWSISLNSDWIPRDRICLGLRLYGWFILLLKSCCPCGGMLSMTMKEIGSSDLVLESLANCFSRSPGEIKARYEVLTQGERAIGCFNNRINEEISHIGSTLLDKDLDAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPKWGPVGEENAPCGPLCYRSVLKSDKNGTGGSPLRSDLEEKHPMSSDGTGAQISTKKKSSCKTGRRRAKSYQSESASSNAKNISESSESENGPRQDGNTIHQSPPPNSKITGAGGIRKRNSKRVAERVLICMQKRQKKMAASESESLASVGHCPNDVKLKSNSCKENDDTSSSSRKNIRSPIPGRSRRRESLTQKCNKFDQNETLNNSSNEIITHLPADSCDDNSRKEECVDENLCKQDLADDKSWKAIEKGLYEKGIEIFGRNSCLIARNLLNGMKTCWEIFQYMNYSENKNGSQVGDGSNPHLEGYTKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQTACGKQCACLLNGTCCALRVARIVLEDAIVPKVNVVVVNVLVLQQIENVIQMFVGIVGCGDGTLGVPNQRGDNYECRNMKLLLKQQQRVITLYCFFAFFLTQVLLGRSDISGWGAFLKFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSSGRAKKLA 1832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25640910 25677729 + ClCG02G012280.2 Cla02g01205 267331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01205 1832 Gene3D - 43 117 - -
Cla02g01205 1832 SUPERFAMILY Calcium ATPase, transmembrane domain M 312 558 IPR023298 -
Cla02g01205 1832 SUPERFAMILY HAD-like 562 846 IPR036412 -
Cla02g01205 1832 SUPERFAMILY HMA, heavy metal-associated domain 45 117 IPR036163 GO:0046872
Cla02g01205 1832 ProSitePatterns E1-E2 ATPases phosphorylation site. 566 572 IPR018303 -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 997 1017 - -
Cla02g01205 1832 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 736 846 - -
Cla02g01205 1832 Coils Coil 1085 1105 - -
Cla02g01205 1832 ProSiteProfiles SET domain profile. 1497 1798 IPR001214 GO:0005515
Cla02g01205 1832 Gene3D - 737 811 IPR023214 -
Cla02g01205 1832 SUPERFAMILY SET domain 1602 1801 IPR046341 -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1807 1832 - -
Cla02g01205 1832 PRINTS P-type cation-transporting ATPase superfamily signature 564 578 - -
Cla02g01205 1832 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Cla02g01205 1832 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Cla02g01205 1832 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Cla02g01205 1832 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 833 1832 IPR025778 GO:0031519
Cla02g01205 1832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 737 821 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01205 1832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 317 736 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01205 1832 PANTHER COPPER-TRANSPORTING ATPASE HMA4 736 846 - -
Cla02g01205 1832 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 277 735 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cla02g01205 1832 Gene3D - 332 454 - -
Cla02g01205 1832 Pfam SET domain 1744 1797 IPR001214 GO:0005515
Cla02g01205 1832 SMART set_7 1726 1804 IPR001214 GO:0005515
Cla02g01205 1832 Gene3D - 531 736 IPR023214 -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1420 1434 - -
Cla02g01205 1832 Pfam haloacid dehalogenase-like hydrolase 560 733 - -
Cla02g01205 1832 ProSiteProfiles Heavy-metal-associated domain profile. 45 111 IPR006121 GO:0046872
Cla02g01205 1832 CDD P-type_ATPase_Cu-like 205 846 - -
Cla02g01205 1832 Gene3D SET domain 1701 1804 IPR046341 -
Cla02g01205 1832 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 19 735 - -
Cla02g01205 1832 CDD HMA 48 110 IPR006121 GO:0046872
Cla02g01205 1832 PANTHER COPPER-TRANSPORTING ATPASE HMA4 19 735 - -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1288 1382 - -
Cla02g01205 1832 Pfam E1-E2 ATPase 363 542 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase 1 signature 45 70 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase 1 signature 260 285 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase 1 signature 71 94 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase 1 signature 205 226 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase 1 signature 240 260 - -
Cla02g01205 1832 Gene3D - 571 649 IPR023299 GO:0000166
Cla02g01205 1832 Gene3D - 650 702 IPR023299 GO:0000166
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1331 1370 - -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1419 1453 - -
Cla02g01205 1832 SUPERFAMILY Calcium ATPase, transduction domain A 364 450 IPR008250 -
Cla02g01205 1832 MobiDBLite consensus disorder prediction 1807 1825 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase signature 334 352 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase signature 262 281 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase signature 314 333 - -
Cla02g01205 1832 PRINTS Copper-transporting ATPase signature 473 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01205 Cla-Chr2:25640910 Cla04g00465 Cla-Chr4:17517724 0 dispersed
Cla02g01205 Cla-Chr2:25640910 Cla11g01161 Cla-Chr11:24336026 1.39E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60650 PF00122 E1-E2_ATPase 3.90E-46 No_clan Cla TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01205 K17686 - csv:101214276 1429.46